Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1128 ATGGATGCTTTCCTTTTCATTCTTACATTCTTGTTGAGCTTCCACAAACTTTCTTCTGCCGCAAGCAGTTCAAAAACATATATTATCCATGTGGAGGGGCCACAGGATAAGACACTAGATCAAACAGAAGATTTAGAGAGTTGGTACCATTCATTCATGCCACCTACTACTATGAGCTCTGAGGAACAGCCTCGAATGATTTATTCGTACCGGAACGTGATGAGTGGTTTTGCTGCAAGACTTACTGAAGAAGAGCTGAGAACAATGGAAAAAAAGAACGGCTTTATCTCTGCTCGTCCCGAAAGGATGCTGCATTGCCTAACCACAAATACCCCACAATTTTTGGGGTTGCAGAAACAAACGGGATTATGGAAGGAATCAAACTTTGGAAAGGGAATAATAATTGGGGTGCTGGATTCTGGAATCACGCCTGGTCATCCTTCATTTAGCGATGCAGGAATGCCGCCGCCACCACCTAAATGGAAAGGGAGATGCGAGATTAATGTGACAGCTTGCAACAACAAACTAATTGGAGTAAGGGCTTTCAACCTTGCAGAGAAGTTGGCTAAAGGAGCAGAGGCAGCAATTGATGAGGATGGACATGGAACTCACACAGCAAGCACAGCTGCTGGTGCTTTTGTTGATCATGCAGAATTACTAGGAAATGCCAAAGGAACAGCAGCTGGGATTGCCCCTTACGCTCACCTGGCAATCTACAGAGTATGCTTTGGAAAAGACTGCCATGAGAGTGACATATTGGCAGCAATGGATGCAGCTGTGGAGGATGGCGTGGATGTAATATCAATATCCCTCGGCTCGCATACGCCGAAATCTATTTTCGATGATAGCACTGCAATAGGTGCATTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTCTGGCCCTTTCCATGGCTCCTTAATTAATGGAGCCCCTTGGGTCCTCACAGTTGGAGCAAGCAATATTGACAGAAGCATTGCAGCAACAGCAAAGCTGGGAAATGGGCAAGAATTTGATGGGGAATCTGTTTTCCAGCCTTCCGATTTCTCTCCAACATTATTACCCTTGGCATATGCTGGAAAGAATGGCAAACAAGAAGCTGCATTTTGTGCTAATGGATCCTTGAATGATAGTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGAGGTATAGGAAGAATTCCCAAAGGAGAGGAAGTAAAAAGAGTAGGTGGTGCAGCCATGATTCTCGCGAATGATGAAAGCAATGGCTTCAGTCTCTCAGCTGATGTGCATGTTCTACCTGCAACACATGTAAGCTACGATGCTGGACTTAAGATTAAAGCCTATATAAATTCCACTGCAATACCTATAGCAACCATTTTATTCAAGGGGACTATAATTGGAAACTCCTTAGCTCCTGCTGTTACATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTGAACATCCTAGCTGCCTGGCCATTCCCTCTGAATAACGATACTGATTCAAAATCCACTTTCAACTTTATGTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCATAGCTGCTTTGCTCAAAAGCTCTCATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAATCAATTTTGAACGCAAACTCATTGTTGATGAAACACTTCACCCTGCAGATGTTTTTGCCACAGGTTCTGGTCATGTGAATCCATCAAGAGCAAATGACCCTGGGTTAGTTTATGATATTCAACCTGATGATTATATACCTTATCTGTGTGGTCTAGGGTACAGCGATACCCAAGTTGGGATCATTGCACACAAAACAATTAAGTGTTCTGAGACTTCAAGCATTCCCGAAGGAGAGCTTAACTATCCTTCATTTTCTGTTGTGCTTGGTTCCCCGCAGACATTCACAAGGACTGTGACAAATGTGGGTGAGGCCAACTCATCTTATGTTGTCATGGTTATGGCACCAGAAGGGGTTGAAGTGAGGGTCCAGCCAAATAAACTTTACTTTTCAGAAGCAAACCAGAAAGACACGTATTCAGTGACATTCAGCCGTATAAAGTCGGGTAATGAAACTGTGAAATATGTTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACATTGTAAGGAGCCCTATCTCGGTCAACTTTGTATAA 2226 0.438 MDAFLFILTFLLSFHKLSSAASSSKTYIIHVEGPQDKTLDQTEDLESWYHSFMPPTTMSSEEQPRMIYSYRNVMSGFAARLTEEELRTMEKKNGFISARPERMLHCLTTNTPQFLGLQKQTGLWKESNFGKGIIIGVLDSGITPGHPSFSDAGMPPPPPKWKGRCEINVTACNNKLIGVRAFNLAEKLAKGAEAAIDEDGHGTHTASTAAGAFVDHAELLGNAKGTAAGIAPYAHLAIYRVCFGKDCHESDILAAMDAAVEDGVDVISISLGSHTPKSIFDDSTAIGAFAAMQKGIFVSCAAGNSGPFHGSLINGAPWVLTVGASNIDRSIAATAKLGNGQEFDGESVFQPSDFSPTLLPLAYAGKNGKQEAAFCANGSLNDSDFRGKVVLCERGGGIGRIPKGEEVKRVGGAAMILANDESNGFSLSADVHVLPATHVSYDAGLKIKAYINSTAIPIATILFKGTIIGNSLAPAVTSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNDTDSKSTFNFMSGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAIMTSADIINFERKLIVDETLHPADVFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDTQVGIIAHKTIKCSETSSIPEGELNYPSFSVVLGSPQTFTRTVTNVGEANSSYVVMVMAPEGVEVRVQPNKLYFSEANQKDTYSVTFSRIKSGNETVKYVQGFLQWVSAKHIVRSPISVNFV* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1128 741 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Gso17g1128 741 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Gso17g1128 741 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Gso17g1128 741 Gene3D - 612 740 - -
Gso17g1128 741 Pfam Fibronectin type-III domain 642 738 IPR041469 -
Gso17g1128 741 CDD PA_subtilisin_like 334 461 - -
Gso17g1128 741 Pfam Subtilase family 130 561 IPR000209 GO:0006508|GO:0008236
Gso17g1128 741 ProSiteProfiles Serine proteases, subtilase domain profile. 114 595 - -
Gso17g1128 741 Gene3D Peptidase S8/S53 domain 132 608 IPR036852 GO:0004252|GO:0006508
Gso17g1128 741 SUPERFAMILY Subtilisin-like 106 599 IPR036852 GO:0004252|GO:0006508
Gso17g1128 741 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 738 - -
Gso17g1128 741 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 135 146 IPR023827 -
Gso17g1128 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 738 IPR045051 -
Gso17g1128 741 Pfam PA domain 361 447 IPR003137 -
Gso17g1128 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 106 IPR037045 -
Gso17g1128 741 Gene3D - 328 469 - -
Gso17g1128 741 CDD Peptidases_S8_3 104 562 IPR034197 -
Gso17g1128 741 Pfam Peptidase inhibitor I9 26 102 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1128 Gso-Chr17 10763951 10766538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1128 4 740 Subtilisin-like Serine Gene Family AT1G04110 45.278 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1128 - - gmx:100782009 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0432 5 4562289 4564974 Gso17g1128 17 10763951 10766538 GST
Gso17g1128 17 10763951 10766538 Gso11g0243 11 2034011 2036495 PCT