Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1117 ATGGCGTCGAACCACGAGATGGATCAAGACGACGACGGAGGAGCAACCGACCTCAGCACCAGCGACGCCGAAACCACCACCACCAACCTCAATGGAGTCCCCAAACAGCACAACGCGTTTGAAGAAGAAACAACGGGGTTTCAAGTCTTGCCGCTGAAAAAGGAGGAGCCAACATATTCGGACCCGAACATGGGGATTACTCCCGTCGCGATGCAGGTTCCGGTCAAACCGGCAAAGCGCTCCTCCACGAAGGACCGCCACACGAAAGTGGAAGGGCGCGGCCGCAGGATCCGAATACCCGCCACCTGCGCCGCCCGGATCTTCCAGCTGACCCGAGAGCTCGGCCACAAGTCCGACGGCGAGACCGTCCGGTGGCTCCTGGAGCACGCCGAGCCGGCCATCATCGAGGCCACCGGCACCGGTACAGTTCCGGCCATCGCGGTCTCCGTTGGCGGCACGCTCAAAATCCCAACCACCTCATCGAACGAGAAAGAAGCCGTCGCCGACGCCTCAAACAAGAAGCGGAAACGCCCCTCAAACAGCGAGTTCGTGGACATAAACATAAACGACAGCGTTTCGCAGTCGTCCGGTCTGGCCCCGGTTCATGTGGCGCATGGCCTGGTCCCGGTCTGGGCCGTGACTAACCCCAGCATGGTGGTCCCCGCTAACGCCTTCTGGATGACACCCAACCCCCCCATGGGACCCGCAAACCAGCAGCATCAGTTATGGGCCTTATCTCCCTCCGTCTTCAACGTCGCGGCCAGGCCCATATCGCCTCTGGTCACAACAAATATTCCAGAAGCATGGCCCATTATGACGGCGTGCAGTAACGACTCCAACTCCGCCGTTAGCACGAGCACGGTGGGGGCTAAGGTGGCAACGGAGTCCAGCATGGCACCCAGTGTTAGTTCTAGTGGGACCAAGAGTGCCAGGACTCGGCTATTAAGGGATTTTTCGCTCCAAATTTACGATAAGCAAGAGTTGCAGTTCTTGGGCCGCTCTGGGACTCACGCGCAGAGTTAG 1023 0.5953 MASNHEMDQDDDGGATDLSTSDAETTTTNLNGVPKQHNAFEEETTGFQVLPLKKEEPTYSDPNMGITPVAMQVPVKPAKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSSNEKEAVADASNKKRKRPSNSEFVDININDSVSQSSGLAPVHVAHGLVPVWAVTNPSMVVPANAFWMTPNPPMGPANQQHQLWALSPSVFNVAARPISPLVTTNIPEAWPIMTACSNDSNSAVSTSTVGAKVATESSMAPSVSSSGTKSARTRLLRDFSLQIYDKQELQFLGRSGTHAQS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1117 340 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 16 338 - -
Gso17g1117 340 MobiDBLite consensus disorder prediction 167 181 - -
Gso17g1117 340 MobiDBLite consensus disorder prediction 14 35 - -
Gso17g1117 340 ProSiteProfiles TCP domain profile. 83 137 IPR017887 -
Gso17g1117 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 338 IPR005333 GO:0003700
Gso17g1117 340 Pfam TCP family transcription factor 82 173 IPR017887 -
Gso17g1117 340 MobiDBLite consensus disorder prediction 159 181 - -
Gso17g1117 340 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1117 Gso-Chr17 10655780 10657164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1117 42 337 TCP Transcription Factor Family AT2G45680 44.940 3.95e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso17g1117 TCP 7.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1117 - - gmx:100781096 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0422 5 4451948 4453395 Gso17g1117 17 10655780 10657164 GST