Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1105 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCAAGGCACAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCACTTCCAGCTACCTTCTTCCATGAGCACGCAGAGATTGGACCTGCCATCATGCACCACCGCCACCTTCACTCGCAACAACAAAGACCATCATCATCATCAGCCCCTAAGACCAGTGGGCCTCTCCGTGGATCAGAAACACATCGAAGCCAAGACCAGCACCTGTTCTCTCAAGCAACACATTCGACTCCCACCTCTTGCCATCACTGCATCAGCAACACCATTGGTGGAAGAGTCATCCATCATCAACGACAACAACAACAAGAGTTTGAAGAAGAGGCTCGCGGCGGAACACCACGACGATTCCTTCGCCAAGAGGAAAAAGAGTAGCAGTACTACTGAGTGTGATTGGTTTCAGCCTGATGTTGTTGAGACTACTACTTTAGGAGGGTTTAACAACAACAACACTTCACTTGTTTCTTTCTCCTCAGAGGAACAAGAGAGGGTTTGTTTTCTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTCCCTTTGAACCCCTGGCTGGAATCATGCGTAACAAAGATCACAAATTTCGGCGAGGGTAGCCACCGTCATCCTCATCATCACCACCACCCCCACCACCACAACGACCATGCCTCAGGCTCCGTCTCCAATGCTTCCTCGGAGAGCCAAAGCCTGAGACTAAACGACAACGTTTCAGAACACGAAGTGGGAAACGGTTCAGGGAACCCTTACTACCATCACCGCAAGGTGGAAGCAGGGGAAGAAGACGACCATCACGGGTTCGAGCTCGTGAGCTTGCTCACCGGCTGCGTCGACGCAATTGGATCGAGAAACGTCACTGCAATCAACCATTTCATAGCAAAATTGGGTGATCTTGCTTCCCCCAAAGGAACAACCTCGATAAGCCGCATTTGCGCTTACTTCACAGAAGCATTAGCCATCAGAGTCACGAGGCTCTGGCCTCACGTTTTTCACATCGCCGCCGCCACCACTTCACGCGACATGGTGGAGGACGATGAATCCGCCACAGCATTAAGACTTCTCAACCAAGTAACCCCAATTCCAAAGTTCCTTCATTTCACATCAAACGAGATGCTGCTGAGGGCCTTTGAAGGCAAAGACAGGGTCCACATAATAGATTTCGACATCAAGCAAGGCCTTCAATGGCCCAGCTTGTTCCAAAGCCTAGCTTCGAGGTCCAACCCTCCGATCCACGTGAGGATCACGGGGATCGGAGAGTCCAAACAGGACCTCAACGAAACCGGAGAGAGACTCGCCGGTTTTGCTGAGGTCTTAAACCTCCCCTTCGAGTTCCACCCTGTGGTGGACAGACTCGAGGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCACGAAACGGTGGCTGTGAACTGCGTTTCGCAGCTTCACAAGACACTCCACGACGGTAGCGGAGGAGCTTTAAGGGACTTCTTGGGTCTAATCCGCAGCACGAAACCCAGCGTCGTCGTCGTGGCGGAACAAGAAGCGGAGCACAACCACACGAGATTGGAGGCGAGGGTGTGCAACTCATTGAAATACTATTCAGCATTGTTTGATTCCATCGAGGAGAGTGGGCTTCCGATAGAGAGTGCGGTGAGGGTGAAAATAGAAGAGATGTACGGTAAGGAGATAAGGAACATTATTGCTTGCGAAGGAAGGGAGAGGGTGGAGAGGCACGAGAGTTTCGGGAATTGGAGGAGGATGATGGTGGAGCAAGGAGGGTTCAGATGCATGAGTGTTACCGAAAGAGAATTGAGCCAGAGCCAGATGCTGTTGAAGATGTATTCTTGCGAGAGTTACAGTGTGAAGAAACAAGAGAAGGAAGGAGCAACAGGAGTTACTCTTAGTTGGTTGGAGCAACCTTTGTACACTGTCTCTGCTTGGGGTCCTGTTGATGCTGCTGCGGGTACCTCGTCCTCGTTTTCTCATCCAAGTTGA 2010 0.5119 MLAGCSSSTLLSPRHRLRSEAPAQFQACHFQLPSSMSTQRLDLPSCTTATFTRNNKDHHHHQPLRPVGLSVDQKHIEAKTSTCSLKQHIRLPPLAITASATPLVEESSIINDNNNKSLKKRLAAEHHDDSFAKRKKSSSTTECDWFQPDVVETTTLGGFNNNNTSLVSFSSEEQERVCFLPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRHPHHHHHPHHHNDHASGSVSNASSESQSLRLNDNVSEHEVGNGSGNPYYHHRKVEAGEEDDHHGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPKGTTSISRICAYFTEALAIRVTRLWPHVFHIAAATTSRDMVEDDESATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPIHVRITGIGESKQDLNETGERLAGFAEVLNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVSQLHKTLHDGSGGALRDFLGLIRSTKPSVVVVAEQEAEHNHTRLEARVCNSLKYYSALFDSIEESGLPIESAVRVKIEEMYGKEIRNIIACEGRERVERHESFGNWRRMMVEQGGFRCMSVTERELSQSQMLLKMYSCESYSVKKQEKEGATGVTLSWLEQPLYTVSAWGPVDAAAGTSSSFSHPS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1105 669 MobiDBLite consensus disorder prediction 228 244 - -
Gso17g1105 669 ProSiteProfiles GRAS family profile. 271 653 IPR005202 -
Gso17g1105 669 PANTHER SCARECROW-LIKE PROTEIN 28 6 657 IPR030027 -
Gso17g1105 669 Pfam GRAS domain family 280 652 IPR005202 -
Gso17g1105 669 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 657 IPR005202 -
Gso17g1105 669 MobiDBLite consensus disorder prediction 208 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1105 Gso-Chr17 10531148 10534613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1105 1 652 GRAS Transcription Factor Family AT1G63100 51.937 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso17g1105 GRAS 2.5e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1105 - - gmx:100777890 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0412 5 4345421 4348898 Gso17g1105 17 10531148 10534613 GST