Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1102 ATGGGTAAGGCGTCGAAGTGGTTTCGCGGGCTTCTTGGTCTCAAAAAAACAGAGTATGCCACCTCACCCGCCAAGCCTCCCAAAGAGAAACGCCGGTGGAGCTTCGTTAAATCATCATACACAGAAAAAGACAACACCACTGCCGCCACGTGTCCACCACTAAGAAACAACAACAACCACGCAATGGCAGTAGCAGCAGCCACCGCTGCGGTGGCCGAAGCGGCGGTGGCTGCCGCCGAAGCAGCCGCCGTCGTGGTGAGACTAACTAGTAACAGCGGCAGGTGCGCCGACGGCGGACCCACCCGGATTCGCCAACATTGGGCTGCTGTTAAGATTCAAGCCGCTTTTCGTGGCTGTTTGGCAAGGAGAGCACTGCGAGCATTAAAGGGATTGGTGAAGTTGCAAGCATTGGTGAGAGGCCACATTGAGAGAAAACGGACGGCAGAGTGGCTGAAAAGATTGCAAGCACTCTTACATGCACAGACCCAAGTTTCTGCAGGGTTGACCCTGCATGCCTCACCTTCGAGTTCAAAGTTATCAAGCCACCTCCAAGGTCCAGAAACACCCGAAAAATTTGAAAGCCCCATTAGATCTAAGAGCATGAAACATGAGCACTCACCTATACTCAAGAGAAATGGCTCCAAATCCTGTGCCCTGATCAATGGCTATCAAGAGATATGTGGGAGTAGATCAGAGAGTCAAGGGAATGAACAATTATGGAACTCAGGAAGATCAATGAATAGAGCACACGGCTCCAATGATGAAAGAAATGGCAAGGTTCTTGAAGTTGATTCTGGAAAACCGCACTTCACACTAAAGCGTCGAAACCTCTCTTACTCCACAGGCTCTGATCTTTATAGTAAGAGTTTGAACAGCACAAAGGAATCAACATCTCTTCAATCTGCTCAAAGTCCATGTTGTGAGGTTCAGTCTCACAGTTACAGCTCGCAAAAAGTGAACAATGAGGTTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCACAATACTTATCTGCCTCTTCTAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCTACTAGAAGTGATGGCTCTAGAAGCTACATTCGCGGTTACCCTGATTATCCTAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAGGCCAGATCTCTGAGTGCACCAAAACAAAGGCCTCAAAGTGAGAGGTCTGGTTCATCGGATAGATACTCACTCAATGGATTTGATATGTCAAGATTGGCCACTCAAAGGGCAATGCAAGCAAGCTTCACCAACAAAGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGTGGGGTACAGATTCTGA 1344 0.4814 MGKASKWFRGLLGLKKTEYATSPAKPPKEKRRWSFVKSSYTEKDNTTAATCPPLRNNNNHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSNSGRCADGGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLKRLQALLHAQTQVSAGLTLHASPSSSKLSSHLQGPETPEKFESPIRSKSMKHEHSPILKRNGSKSCALINGYQEICGSRSESQGNEQLWNSGRSMNRAHGSNDERNGKVLEVDSGKPHFTLKRRNLSYSTGSDLYSKSLNSTKESTSLQSAQSPCCEVQSHSYSSQKVNNEVEESPFCTADNSPQYLSASSKDDGFKRSPFTPTRSDGSRSYIRGYPDYPSYMACTESSKAKARSLSAPKQRPQSERSGSSDRYSLNGFDMSRLATQRAMQASFTNKAYPGSGRLDKLGMPVGYRF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1102 447 MobiDBLite consensus disorder prediction 192 210 - -
Gso17g1102 447 Pfam Protein of unknown function (DUF4005) 335 412 IPR025064 -
Gso17g1102 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 151 IPR027417 -
Gso17g1102 447 Gene3D - 103 157 - -
Gso17g1102 447 MobiDBLite consensus disorder prediction 234 248 - -
Gso17g1102 447 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Gso17g1102 447 MobiDBLite consensus disorder prediction 249 267 - -
Gso17g1102 447 MobiDBLite consensus disorder prediction 234 267 - -
Gso17g1102 447 PANTHER IQ-DOMAIN 5-RELATED 1 442 - -
Gso17g1102 447 MobiDBLite consensus disorder prediction 339 360 - -
Gso17g1102 447 MobiDBLite consensus disorder prediction 171 210 - -
Gso17g1102 447 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Gso17g1102 447 MobiDBLite consensus disorder prediction 339 364 - -
Gso17g1102 447 SMART iq_5 104 126 IPR000048 GO:0005515
Gso17g1102 447 SMART iq_5 127 148 IPR000048 GO:0005515
Gso17g1102 447 MobiDBLite consensus disorder prediction 381 408 - -
Gso17g1102 447 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Gso17g1102 447 Pfam IQ calmodulin-binding motif 106 126 IPR000048 GO:0005515
Gso17g1102 447 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1102 Gso-Chr17 10500121 10504514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1102 1 447 IQD Protein Family AT4G23060 41.935 6.40e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1102 - - gmx:100776656 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0409 5 4306089 4309581 Gso17g1102 17 10500121 10504514 GST