Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1098 ATGGAAGACGAAATCAACAGAGAACTCGACCTTCTCCCATCCTCGCGCTCCGAATCCTCCCTCCTCCGCCTCCGCTCGGCGGTCTCCTCCTCCTCCACCACAGACTGCGGCGGCGGCGGAGGCGGAGGCGCCACCCCCTCTCTCGACCTGCAGCTCTCCATCAGCGTGAGGCCGCCCGCGGCCGTGCTCATGTGCGACGGCGTGGACGCGCTCAAGTGGCAGGCCGCGGAGCAAATCCGCCTCGCTGCGATGGAGAAAGCCTACGCGGAGCGGGTGAGGGAGCTCACCCGCCGCGAGATGGAGATGGCGCAGTCGGAGTTCGCACGTGCGCGCCAAATGTGGGAGCGTGCGAGAGAAGAGGTTGAGCGCGCCGAGAGGATCAAGGAACGAGCCACCAGAAAGGTAGATTCCACGTGCATGGAGATCACTTGCCATTCCTGTAGGCAAAGGTTCAGGCCCGCTTAA 465 0.6452 MEDEINRELDLLPSSRSESSLLRLRSAVSSSSTTDCGGGGGGGATPSLDLQLSISVRPPAAVLMCDGVDALKWQAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKERATRKVDSTCMEITCHSCRQRFRPA* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1098 154 PANTHER OS03G0310200 PROTEIN 1 153 IPR039288 GO:0009630
Gso17g1098 154 Coils Coil 93 134 - -
Gso17g1098 154 PANTHER OS03G0310200 PROTEIN 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1098 Gso-Chr17 10469211 10470035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1098 51 152 C2H2 Transcription Factor Family AT2G01940 36.538 3.30e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1098 - - gmx:100819947 231.491