Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1096 ATGGCGTCTTTGCAGCACCCCACAGCTTCCCTCCAATCCAAACACATCCTAATCCCCCGAAATACCCTCTCCCAGAAACCCATCCTCAACCTCTCCCTCCATGGTACCACCTTCACCCCCCTCAAGCTCAAATTCGGCGTTACCACCACCACCGCCGCCGCCGCCGCCACCCGCCGCTCCACCGGCGCCACGGGAGCCAGAATGTCAGCTACCGCAGCCTCCAGCTACGCCGCGGCCCTCGCCGACGTGGCGGCCGCGAACAACACCCTCGACGCGACAACCGCGGACATCGAGAAAATCGACGAAATCTTCTCGGACCCGCAGGTGTCGGACTACTTCGCGGACCCCACCCTGGCCGTGGAGAAGAAGCGCCAGCTGATAGACGAGATTGCGGAATCCTCGGAGTTCCAGCCCCACACGAGAAACTTCCTCTACATCCTCGTGGACGCGCAGAGGATAGACCTCATCAACGAGATAGCAAAAGAGTTCGAACTGGTTTACAATTCCTTGACCGAAACGGAGCTGGCGGTGGTGACGTCGGTGGTGAAGCTGGAGTCGCAGCACCTGGCGCAGATCGCGAAGCAGGTTCAGAAGCTCACTGGGACGAAGAACGTGAGAATTAAGACGCTCCTTGACCCTAGTTTGGTGGCGGGTTTCACTGTCAGGTATTCGGGGTCTAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGATATTGCTGCTCAGCTTGAGCTGGGTGATATCTCACTCGCCGTATGA 762 0.584 MASLQHPTASLQSKHILIPRNTLSQKPILNLSLHGTTFTPLKLKFGVTTTTAAAAATRRSTGATGARMSATAASSYAAALADVAAANNTLDATTADIEKIDEIFSDPQVSDYFADPTLAVEKKRQLIDEIAESSEFQPHTRNFLYILVDAQRIDLINEIAKEFELVYNSLTETELAVVTSVVKLESQHLAQIAKQVQKLTGTKNVRIKTLLDPSLVAGFTVRYSGSKLIDMSVRKQLEDIAAQLELGDISLAV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1096 253 PANTHER BNACNNG66500D PROTEIN 56 252 - -
Gso17g1096 253 PANTHER ATP SYNTHASE DELTA CHAIN 56 252 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 170 IPR026015 -
Gso17g1096 253 Gene3D - 72 164 IPR026015 -
Gso17g1096 253 Pfam ATP synthase delta (OSCP) subunit 73 244 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 PRINTS ATP synthase delta subunit signature 72 91 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 PRINTS ATP synthase delta subunit signature 141 152 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 PRINTS ATP synthase delta subunit signature 152 166 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 PRINTS ATP synthase delta subunit signature 203 218 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 PRINTS ATP synthase delta subunit signature 219 237 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 Hamap ATP synthase subunit delta [atpD]. 68 246 IPR000711 GO:0015986|GO:0046933
Gso17g1096 253 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 205 224 IPR020781 GO:0015986|GO:0016020|GO:0046933
Gso17g1096 253 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 73 244 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1096 Gso-Chr17 10441745 10442737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1096 1 252 Primary Pumps ATPases AT4G09650 60.236 3.14e-97 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1096 K02113 - gmx:100819224 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0401 5 4224781 4225828 Gso17g1096 17 10441745 10442737 GST