Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1075 ATGGCCCCTCTTTATAGTGCCTTCAACGGCGAAATCGATGGCGAAAATCTCCCTTTAGCTTTTGATATCTGGGCAACCAATCTATGGGCCTATGGCTATTATCCTCATCAACCTGCTATATCGGAGAATAGCACTTCTAAATTGGTTGATTTCCCCTTTTGCGATGGCACCATCATCAGGGATAACAAAAGGGTCAAGAGAACCGTGTGTTTCCCCATTTATAACAGCGTTAGTTGCCATAGTTTCTTCAACACCAACAGCAGTAGTAGGAATAGCATACCAAAACTCCACTTCAGAGATCACATACGGACTTACACTCAAAGATATCTCGCAGCTGAACCCGTAGAGGAGGCATCAGAAGATACAAACAGTTCAGAAAGTAGTGGAGGCGAAGAAGATGGGTGTGCTGATGGAGTGAGGCTTGTTCAGCTTCTAATAGCGTGTGCGGAAGCGGTGGCTTGCCGCGACAAGTCACACGCTTCCATATTACTTTCCGAACTTAAAGCGAATGCTTTAGTGTTCGGATCCTCATTCCAAAGAGTTGCTTCCTGTTTCGTCCAAGGCCTCACCGAGAGGCTCAATCTGATTCAGCCCATCGGGTCCGCGGGCCCGATGATGGCACCCGCCATGAACATCATGGACGCCGCCTCGGACGAAATGGAGGAAGCATACAGGTTGGTTTATGAACTGTGTCCGCACATCCAGTTCGGACACTATTTGGCTAATTCCACAGTATTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCATGTCGTGGACCTAGGCATGAGTCTTGGTCTAAGACATGGACACCAATGGAGAGCTCTGATCCAGAGTCTCGCCAACCGTGCAAGTGGCGAACGCGTTCGTCGCCTGCGGATCACGGGGGTGGGACTCTGTGTCAGACTTCAAACCATTGGAGAAGAACTCTCCGTATATGCTAACAATTTGGGTATCAACTTGGAGTTCTCAGTGGTTAATAAGAATTTGGAAAATCTGAAACCAGAGGACATAGAAGTGAGGGAAGAAGAAGTTCTTGTGGTGAACAGCATTCTGCAGCTTCATTGCGTGGTGAAGGAGAGCCGCGGGGCTTTGAATTCGGTGCTGCAGATGATTCACGGGCTTGGACCCAAAGTGTTGGTGATGGTTGAGCAGGACTCGAGTCATAATGGACCCTTTTTTCTAGGGAGGTTTATGGAATCATTGCACTATTACTCTTCAATTTTTGACTCGTTGGATGTTATGCTGCCAAAGTATGACACTAAGAGGGCAAAGATGGAGCAGTTTTACTTTGCCGAGGAAATAAAGAACATTGTGAGCTGTGAGGGGCCGTTGAGAATGGAGAGGCACGAGAGGGTGGACCAGTGGAGAAGGAGAATGAGCAGAGCTGGGTTTCAAGCTGCACCTATAAAGATGGTGGCTCAGTCTAAGCAGTGGCTTCTCAAGAACAAGGTTTGTGAGGGTTATACTGTTGTGGAAGAGAAGGGGTGTTTGGTTTTTGGATGGAAGTCGAGGCCTATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1545 0.4783 MAPLYSAFNGEIDGENLPLAFDIWATNLWAYGYYPHQPAISENSTSKLVDFPFCDGTIIRDNKRVKRTVCFPIYNSVSCHSFFNTNSSSRNSIPKLHFRDHIRTYTQRYLAAEPVEEASEDTNSSESSGGEEDGCADGVRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPIGSAGPMMAPAMNIMDAASDEMEEAYRLVYELCPHIQFGHYLANSTVLEAFEGESFVHVVDLGMSLGLRHGHQWRALIQSLANRASGERVRRLRITGVGLCVRLQTIGEELSVYANNLGINLEFSVVNKNLENLKPEDIEVREEEVLVVNSILQLHCVVKESRGALNSVLQMIHGLGPKVLVMVEQDSSHNGPFFLGRFMESLHYYSSIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQSKQWLLKNKVCEGYTVVEEKGCLVFGWKSRPIVAVSCWKC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1075 514 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 513 IPR005202 -
Gso17g1075 514 PANTHER DELLA PROTEIN RGL1-LIKE 41 513 - -
Gso17g1075 514 ProSiteProfiles GRAS family profile. 132 513 IPR005202 -
Gso17g1075 514 Pfam GRAS domain family 141 513 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1075 Gso-Chr17 10203806 10205787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1075 133 514 GRAS Transcription Factor Family AT1G66350 37.726 2.09e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso17g1075 GRAS 8.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1075 - - gmx:100813548 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0380 5 3969759 3971750 Gso17g1075 17 10203806 10205787 GST