Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1057 ATGGCTCTACTCAAACAATGGCCTTACGAAGTGTTTTCTTCTACCTTCTATATATCTCTTTCTTTCTTTATCAGTGTGCTTTTATTGTTTAAGCTCACAAAAAGAACCAAACCCAAAACCAATCTGAATCTGCCTCCATCTCTACCAAAACTACCAATCATCGGTAACATTCATCAGTTTGGAACACTGCCACATCGATCTCTTCGAGACCTCTCTCTCAAATATGGTGATATGATGATGTTGCAGTTGGGGCAGATGCAAACTCCAACCCTAGTGGTTTCATCTGTAGATGTGGCCATGGAAATAATCAAAACTCATGACCTAGCCTTTTCTGACAGACCCCACAACACTGCTGCAAAGATCTTGCTCTATGGATGCACAGACGTTGGCTTCGCAAGCTATGGAGAAAAGTGGAGACAGAAAAGGAAAATATGCGTCCTTGAACTTCTAAGCATGAAAAGGGTGCAATCATTTCGTGTCATAAGGGAAGAAGAGGCTGCGAAGTTGGTAAATAAGCTACGTGAGGCAAGCTCGAGTGATGCAAGTTACGTGAACCTAAGTGAGATGCTTATGTCAACGTCTAATAATATTGTGTGTAAGTGTGCTATTGGAAGGAACTTTACAAGAGATGGTTACAACAGTGGGAAAGTGTTAGCGAGGGAGGTTATGATTCATCTCACAGCTTTCACAGTGAGAGATTACTTTCCTTGGTTGGGTTGGATGGATGTTCTCACTGGAAAAATTCAGAAATACAAGGCCACTGCTGGAGCAATGGATGCTTTGTTTGATCAGGCAATTGCTGAACATTTGGCTCAGAAAAGAGAAGGTGAACACTCCAAAAGGAAAGACTTCCTGGATATCCTACTCCAACTTCAAGAGGATAGCATGCTCAGCTTTGAGCTCACCAAAACTGACATCAAAGCACTTGTAACGGACATGTTTGTGGGAGGTACTGATACAACTGCGGCGGTATTAGAATGGGCCATGTCAGAGCTTTTAAGAAATCCGAACATAATGAAAAAAGTTCAAGAAGAAGTGAGGACAGTTGTAGGTCATAAATCAAAAGTGGAAGAGAATGATATTAGTCAAATGCACTATCTAAAATGTGTAGTCAAAGAAATTCTAAGGTTACATATTCCTACTCCTCTTTTGGCTCCTAGAGTAACAATGTCTGATGTAAAACTGAAAGGATATGATATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATGCAAAGAGATCCTAAATTTTGGGAACGCCCTGAAGAGTTCCTGCCAGAAAGATTCGAAAATAGTAAAGTTGATTTTAAAGGTCAAGAATATTTTCAGTTTATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGGATGAATTTTGGAATTGCTTCTGTTGAGTATCTGCTTGCTAGTCTTCTTTACTGGTTTGATTGGAAGTTGCCTGAAACTGATACACAAGATGTAGATATGAGCGAGATATTTGGACTTGTTGTCTCAAAGAAAGTACCACTTCTCCTTAAACCAAAAACCTTTTCATTTTAA 1545 0.3981 MALLKQWPYEVFSSTFYISLSFFISVLLLFKLTKRTKPKTNLNLPPSLPKLPIIGNIHQFGTLPHRSLRDLSLKYGDMMMLQLGQMQTPTLVVSSVDVAMEIIKTHDLAFSDRPHNTAAKILLYGCTDVGFASYGEKWRQKRKICVLELLSMKRVQSFRVIREEEAAKLVNKLREASSSDASYVNLSEMLMSTSNNIVCKCAIGRNFTRDGYNSGKVLAREVMIHLTAFTVRDYFPWLGWMDVLTGKIQKYKATAGAMDALFDQAIAEHLAQKREGEHSKRKDFLDILLQLQEDSMLSFELTKTDIKALVTDMFVGGTDTTAAVLEWAMSELLRNPNIMKKVQEEVRTVVGHKSKVEENDISQMHYLKCVVKEILRLHIPTPLLAPRVTMSDVKLKGYDIPAKTMVYINAWAMQRDPKFWERPEEFLPERFENSKVDFKGQEYFQFIPFGFGRRGCPGMNFGIASVEYLLASLLYWFDWKLPETDTQDVDMSEIFGLVVSKKVPLLLKPKTFSF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1057 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PANTHER CYTOCHROME P450 71B11-RELATED 5 513 - -
Gso17g1057 514 SUPERFAMILY Cytochrome P450 45 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gso17g1057 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 513 - -
Gso17g1057 514 Pfam Cytochrome P450 45 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1057 514 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1057 Gso-Chr17 10018769 10021178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1057 45 512 Cytochrome P450 AT3G26330 45.359 3.03e-139 409