Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1047 ATGCCATTACCTCATCATCGACCTCATTGTTACATCAAGGGCTTTATTACTCATCAGTGCTCACCCTCTTCTCATATCTATGCTAAAATTCAACCCAACCCTTTTTTTTTTCTTCCTACTCTCATGGAAAACATAGACACCTCAAAATTTTCGCACCAATCTCAAAACCAAAACAAGAATAATATTCCCTTGATGTCTATTGAAATATTAGACAAGTCCTATGAGAAGAGAGTCGTGAATAAGGTTCCAAAAGTAGCAAACAAGAGTGAGAAAAAGTTTCTTGGGGTGAGACAAAGACCTTCAGGAAGATGGATTGCTGAGATCAAGGACTCCTCTCAGAAACTAAGACTTTGGTTAGGAACTTTTGACAAAGCAGAAGAAGCTGCCTTGGCTTATGACTGTGCTGCAAGGCTTCTTAGAGGGAGAAATGCCAAAACAAACTTTCCAAACAACCCTGGAATCATGAACACTACTCATGAAGAAGATTGCAGCATTTTGGGTAAGAATCCAAGGGCTTATCAACTTCTTAAGCATGCAGTCATGAAGAATAACCATGCACTTTATTCCACAGTCATGCCTTGGAAAAACCAGATCATGGTGAGAGACGAATTTGACACCCTTGTTGAGGAAACTATAGTTTGTTCCATTCCTGAACAAGGTTCTGGTTGTTGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTTGTTGTAGCTCCTTCTTTCAGTGCTTCTCATGATGAAACCTCCTAA 756 0.3929 MPLPHHRPHCYIKGFITHQCSPSSHIYAKIQPNPFFFLPTLMENIDTSKFSHQSQNQNKNNIPLMSIEILDKSYEKRVVNKVPKVANKSEKKFLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDKAEEAALAYDCAARLLRGRNAKTNFPNNPGIMNTTHEEDCSILGKNPRAYQLLKHAVMKNNHALYSTVMPWKNQIMVRDEFDTLVEETIVCSIPEQGSGCCGISFGSSKVYSSVVVAPSFSASHDETS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1047 251 CDD AP2 91 151 IPR001471 GO:0003700|GO:0006355
Gso17g1047 251 ProSiteProfiles AP2/ERF domain profile. 92 149 IPR001471 GO:0003700|GO:0006355
Gso17g1047 251 Pfam AP2 domain 92 141 IPR001471 GO:0003700|GO:0006355
Gso17g1047 251 SUPERFAMILY DNA-binding domain 92 150 IPR016177 GO:0003677
Gso17g1047 251 Gene3D AP2/ERF domain 91 150 IPR036955 GO:0003700|GO:0006355
Gso17g1047 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE 42 250 - -
Gso17g1047 251 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Gso17g1047 251 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Gso17g1047 251 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 42 250 - -
Gso17g1047 251 SMART rav1_2 92 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1047 Gso-Chr17 9925020 9926059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1047 81 150 AP2-EREBP Transcription Factor Family AT5G19790 62.857 1.34e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso17g1047 AP2 3.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1047 K09286 - gmx:100807374 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0127 5 1435090 1435974 Gso17g1047 17 9925020 9926059 GST