Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1022 | ATGTCATCAAGTGGAACCATTTGGAGCTATGAGGAAGAAAAAGCATTTGAGAATGCCATAGCTATGCATTGGATTGAGGAATCCTCAAAAGAGCAATGGGAGAAAATTGCTTCAGCAGTTCCCAGCAAAAGCATGGAAGATGTGAAGCAACATTACCAGGTTCTAGTAGAGGATGTAAGTGCAATAGAGGCAGGTCACATATCATTCCCAAACTATGCTGCTTCTGAGGAAATCACATCTTCAAATAAGGACTTTCATGGCTCTTCCAAGGCCACAAGCTCAGATAAAAGATCAAATTGTAATTATGGACGTGGTTTTTCTGGGTTAGGACATGACTCCACCACTCATAGTAGTGGTAAAGGAGGCTTGTCAAGGTCATCAGAACAAGAAAGAAGAAAAGGAATCCCATGGACTGAAGAGGAACACAGGTTATTTTTACTTGGTCTAGAGAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATATCTAGGACTCCCACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATAAGGTTGAATTCAATGAATAGAGACAGGAGGAGGTCTAGTATCCATGATATCACTAGTGTGAACAATGGAGATGTGGCTAATAACCAAGCACCTATTACAGGGCAGCATAGTAGCACAATTCCTTCAAACACAATGGGTGTAGGACAATCCCTTAAGCATAGAGTTCAGGGTCACATACCACCTGGTTTAGGCATGTATGGAACACCAGTTGGACATCCTGTGGCTGCTCCTCCAGGGCACATGGCATCTGCAGTTGGCACTCCTGTCATGCTTCCTCCTGGACCCCACCCCCATGCTCATCCTCATCCACCTTATGTTCTTCCTCTTGCTTACCCAATGGCACCTCCAACAATGCATCAATAA | 909 | 0.4378 | MSSSGTIWSYEEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEDVKQHYQVLVEDVSAIEAGHISFPNYAASEEITSSNKDFHGSSKATSSDKRSNCNYGRGFSGLGHDSTTHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHSSTIPSNTMGVGQSLKHRVQGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHAHPHPPYVLPLAYPMAPPTMHQ* | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1022 | 302 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 1 | 301 | - | - | |
Gso17g1022 | 302 | Gene3D | - | 1 | 69 | - | - | |
Gso17g1022 | 302 | SUPERFAMILY | Homeodomain-like | 131 | 186 | IPR009057 | - | |
Gso17g1022 | 302 | MobiDBLite | consensus disorder prediction | 108 | 124 | - | - | |
Gso17g1022 | 302 | SMART | sant | 133 | 183 | IPR001005 | - | |
Gso17g1022 | 302 | SMART | sant | 4 | 58 | IPR001005 | - | |
Gso17g1022 | 302 | PANTHER | TRANSCRIPTION FACTOR MYBS1 | 1 | 301 | - | - | |
Gso17g1022 | 302 | ProSiteProfiles | SANT domain profile. | 3 | 52 | IPR017884 | - | |
Gso17g1022 | 302 | CDD | SANT | 8 | 56 | IPR001005 | - | |
Gso17g1022 | 302 | SUPERFAMILY | Homeodomain-like | 8 | 62 | IPR009057 | - | |
Gso17g1022 | 302 | ProSiteProfiles | SANT domain profile. | 137 | 185 | IPR017884 | - | |
Gso17g1022 | 302 | ProSiteProfiles | Myb-like domain profile. | 8 | 56 | IPR001005 | - | |
Gso17g1022 | 302 | Pfam | Myb-like DNA-binding domain | 136 | 181 | IPR001005 | - | |
Gso17g1022 | 302 | Pfam | Myb-like DNA-binding domain | 8 | 55 | IPR001005 | - | |
Gso17g1022 | 302 | MobiDBLite | consensus disorder prediction | 102 | 135 | - | - | |
Gso17g1022 | 302 | Gene3D | - | 135 | 187 | - | - | |
Gso17g1022 | 302 | ProSiteProfiles | Myb-like domain profile. | 129 | 181 | IPR001005 | - | |
Gso17g1022 | 302 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 133 | 183 | IPR006447 | GO:0003677 | |
Gso17g1022 | 302 | CDD | SANT | 136 | 181 | IPR001005 | - | |
Gso17g1022 | 302 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 129 | 185 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1022 | Gso-Chr17 | 9660839 | 9662438 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gso17g1022 | Myb_DNA-binding | 9.4e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1022 | - | - | gmx:778049 | 588.186 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0105 | 5 | 1192638 | 1194288 | Gso17g1022 | 17 | 9660839 | 9662438 | GST |