Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1014 ATGATAAAGCAAATTCTTAGCAAATTGCCAAAGAAGGTGCCAAAATCTGACTCATCAGATTCTGCAAGGAGTGATTCTAGCAATACCACTACTTTTGGGAATGTTTTTCAGTGTACAAATGTTGGAAGTACCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTATCATCCGTTGTTTTCCCAGCAAGCATGAGTGCTGGAGTGGAAGCAGTTGACCCTTGTCTGTCCTTCAAAGATGTTTCAAATACACAGAAGCAAAGCCTGTTCATTAGTAAGTTGAATCTTTGCTGCAAAGTTTATGACATGAGTGATCCTGATAAGAACACCACAGAGCAAGATCTCAAACGAAAAACGTTGTTGGAGCTTGTTGATTATGTTTCTTCTGGATCTGTTAAGTTCACAGAACCAGCAATCGCCGCATTGTGTAAAATGTGTGCAACTAATTTGTTCAGGGCTTTCCCACCAAAGTTTCGAACAAGTACTACTGGTGGGGAAACAGAAGATGAAGAACCTATATTTGATCCTGCCTGGTCTCACCTACAAGTTGTTTATGATCTACTCCTTCAGTTCATCAATTATAACTCTCTTGATGTGAAGTTGGCAAAAGCACATATAGATCATGCTTTTATTCTAAGATTACTTGACCTTTTTGATTCAGAGGACCCTAGAGAAAGAGATTGCTTGAAAACAATTCTGCACAGAGTCTATGGGAAATTCATGATTCATAGGCCTTTCATACGGAAATCTGTTAGCAACATCATCTACCGGTTTGTTTTCGAGACCGAGCGACATAATGGAATCGCGGAGCTGTTGGAGATTTTTGGGAGTGTCATTAGCGGGTTTGCCTTGCCATTGAAGGAAGAGCACAAGATATTTTTGTTGAGGGCTTTGGTTCCTTTGCACAAACCTAAATCTGTTGGCATTTATCATCAGCAGTTAACATATTGTGTTGTACAGTTCATAGACAAGGACCAAAGACTGGCTAGCTCAGTGATAAAGGGACTATTGAAGTACTGGCCAGTGACAAATAGCCAAAAGGAGCTCATGTTCATCAGTGAGTTGGAAGAGATTTTGGAAATGACTAGCATGGCTGAGTTTCAGAAGATCATGGTCCCACTGTTCCGACGAATGGCTTTCTGCCTCAATAGTTCTCATTATCAGGTGGCTGAAAGAGCACATTTGCTATGGAACAATGAGCACATTCTGAATCTGATAACGCAAAACAGACAGGTGATTCTGCCTCTAGTGTTCTCAGCAATTGTACATAATGGTCAAAGTCATTGGAACCAAGCAGTGCTGAACCTGACTCAGAACATAAGGAAGATGCTGTCTCAGATGGACGAGGAGCTGGTAGCTGCATGCCAACGCAGGATTGAGGAGGAAGATTCAAGTGCAAGTTCTGCAGCTGAGAGGAGAAGAGTAACATGGGAAAGGCTAGAAGCTGCTGCTGCTAATTGTGTCCCAGTTCAATCTACTACTTCTGTAGGTGGAGCTGGAGATGTTTTAGTCCCAGTAAAATCTGCTACATGCTCAGTGGCATGCTAA 1545 0.4175 MIKQILSKLPKKVPKSDSSDSARSDSSNTTTFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPCLSFKDVSNTQKQSLFISKLNLCCKVYDMSDPDKNTTEQDLKRKTLLELVDYVSSGSVKFTEPAIAALCKMCATNLFRAFPPKFRTSTTGGETEDEEPIFDPAWSHLQVVYDLLLQFINYNSLDVKLAKAHIDHAFILRLLDLFDSEDPRERDCLKTILHRVYGKFMIHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHKIFLLRALVPLHKPKSVGIYHQQLTYCVVQFIDKDQRLASSVIKGLLKYWPVTNSQKELMFISELEEILEMTSMAEFQKIMVPLFRRMAFCLNSSHYQVAERAHLLWNNEHILNLITQNRQVILPLVFSAIVHNGQSHWNQAVLNLTQNIRKMLSQMDEELVAACQRRIEEEDSSASSAAERRRVTWERLEAAAANCVPVQSTTSVGGAGDVLVPVKSATCSVAC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1014 514 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso17g1014 514 PIRSF PP2A_B56 3 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso17g1014 514 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Gso17g1014 514 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso17g1014 514 MobiDBLite consensus disorder prediction 1 28 - -
Gso17g1014 514 SUPERFAMILY ARM repeat 86 460 IPR016024 -
Gso17g1014 514 Gene3D - 82 482 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1014 Gso-Chr17 9578851 9582436 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1014 17 9578851 9582436 Gso17g1014 17 9578851 9582436 ECH
Gso5g0098 5 1093191 1095312 Gso17g1014 17 9578851 9582436 GST
Gso17g1014 17 9578851 9582436 Gso4g1282 4 34214432 34219125 PCT
Gso17g1014 17 9578851 9582436 Gso9g0861 9 18491921 18499228 PCT