Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1012 | ATGTGGAACTCCGCCGAGAACGCCTTCGCCAGATCGTCGTCGTTCAGGGAGGAAACTGAGGACGAGGAAGCGTTGCGCTGGGCGGCGCTCGAGAGGCTTCCCACGTACAAGCGAGCGCGCCGCGGAATCTTCAAGAATGTCATTGGCGACATCAAGGAGATCGACGTCAGAGATCTCCAGGCGCAGGAGCAGCGCCTTCTTCTTGAAAGGCTCGTTGACTGTGTCGACAATGATCCTGAGAGGTTCTTCCAACGCATGAGAAGCCGATTTGACGCAGTAGGTTTGCATTTTCCGAAAATCGAAGTTCGATTTCAGGACTTGACCGTTGAGACTTACGTACATGTCGGTAGCAGAGCTCTGCCAACGATTCCCAATTTCATTTGTAATATGACTGAGGCTCTTTTAAGACAGTTGCGGATGTACAGAAGAAAGAGAAGCAAATTGACAATTCTAGCAGATATCAGTGGGATTATTAAACCTTCAAGGCTAACGTTGCTGTTGGGTCCGCCAAGCTCTGGAAAAACAACACTACTATTAGCTCTTGCTGGTAGGCTAGGACCTGGGTTGCAGATGTCAGGGAACATTACATACAATGGACATAGCCTGAAAGAGTTCGTTCCTCAGAGAACCTCTGCCTATGTTAGCCAACAAGATCGGCATGTGGCAGAGATGACCGTGAGAGAAACTCTCCAGTTTGCTGGTCGCTGTCAAGGCGTTGGATTTAAATTTGATATGTTGCTGGAACTTGCCAGAAGAGAAAAGAATGCTGGAATAAAACCAGATGAAGATCTTGATCTGTTCATGAAGTCATTAGCTCTCGGGGGACAGGAAACAAATCTTGTGGTGGAGTACATCATGAAGATATTAGGTTTGGACATATGTGGTGACACATTAGTGGGAGATGAAATGCTCAAGGGCATCTCAGGGGGGCAAAAGAAGCGGCTTACAACAGGTGAATTATTAATTGGTCCAGCAAGAGTGCTGTTCATGGATGAGATATCAACTGGTCTTGATAGTTCAACTACTTATCAAATTATCAGATATCTTAAGCATTCAACCCGTGCACTTGATGGGACCACAATTGTATCCCTTCTTCAACCAGCTCCAGAGACCTATGAATTGTTTGATGATGTTATTCTTTTGTGCGAGGGTCAGATTGTATATCAGGGTCCCCGTGAAGCTGCTGTTGATTTTTTCAAACAAATGGGATTCAGTTGTCCTGAGCGAAAAAATGTAGCAGATTTCTTACAAGAAGTTACGTCTAAGAAGGACCAAGAGCAGTACTGGTCCGTTCCCGATCGCCCTTACCGATACGTACCTGTTGGGAAATTCGCTGAAGCATTTTCCTTGTATCGTGAGGGAAGGATTTTGTCTGAGCAACTAAATTTACCTTTCGATAGACGCTATAATCATCCAGCTGCCTTGGCAACTGTTAGCTATGGCGCGAAAAGGCTCGAACTTCTCAAGACTAATTACCAGTGGCAGAAGCTTCTTATGAAGCGGAACTCATTTATCTATGTTTTTAAATTTGTTCAGCTGCTTTTGGTTGCCTTAATTACAATGAGTGTTTTCTTCCGAACAACGATGCACCATAATACAATTGACGATGGAGGCTTATATCTTGGGGCACTGTACTTCTCTATGGTTATTATTCTTTTCAATGGTTTTACCGAGGTGTCAATGTTAGTTGCAAAGCTTCCAGTTCTTTACAAGCACAGAGATTTGCATTTCTATCCTAGCTGGGCATATACACTTCCTTCTTGGTTCCTTAGTATCCCAACTTCCCTGATAGAGGCTGGATGCTGGGTGACGGTCTCTTACTATGCAAGTGGATATGATCCTGCATTTACTAGATTTTTGCGGCAGTTCTTGCTTTTTTTCTTCCTGCACCAGATGTCTATAGGTCTGTTTCGTTTGATAGGATCCTTGGGCCGGAATATGATAGTATCCAATACCTTTGGATCCTTTGCCATGTTGGTTGTAATGGCTCTTGGCGGATATATAATTTCAAGAGACCGTATACCTGTTTGGTGGATATGGGGTTTTTGGATTTCTCCATTGATGTATGCACAAAACTCAGCTTCTGTGAACGAGTTCCTTGGACATTCTTGGGATAAGAAAGCTGGAAATCAGACTACCTATTCATTGGGTGAGGCAGTATTAAAAGAGCGAAGTTTGTATGCAGAAAACTATTGGTATTGGATTGGTCTTGGGGCAATGGTTGGATACACAATTTTGTTCAACATTCTATTTACAATCTTCTTGGCTTACCTTAATCCCTTGGGAAGACAACAAGCTGTAGTTTCAAAGGATGAGCTGCAAGAAAGAGAAAAGAGAAGAAAAGGTGAAAGTGTTGTTATAGAGCTGAGAGAGTACTTGCAGCGTTCGGCATCAAGTGGAAAGCATTTTAAGCAAAGGGGAATGGTTCTCCCATTTCAACCACTTTCCATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCTTTGGAATTGAAACAACAAGGGATAGTAGAGGACAAGCTACAGCTTCTTGTTAATGTTACCGGAGCCTTTAGACCTGGTGTGTTGACAGCATTGGTTGGAGTAAGTGGTGCCGGAAAAACGACGCTGATGGATGTGTTAGCTGGCAGAAAAACTGGTGGAGTCATAGAAGGGAGTGTATATATATCTGGCTATCCCAAAAGGCAAGACTCTTTTGCAAGAATTTCCGGTTACTGTGAGCAAACTGACGTTCATTCCCCTTGTTTGACTGTCTGGGAATCCTTACTGTTCTCTGCTTGGCTTCGATTATCTTCAGACGTTGACTTCGAGACACAAAAGGCCTTCGTTGAGGAGGTAATGGAGCTTGTGGAGCTCACTCCGTTAAGTGGAGCACTAGTGGGCCTACCTGGAATTGATGGTCTGTCAACTGAACAGCGAAAAAGATTGACTATAGCTGTTGAATTGGTTGCCAATCCTTCTATAGTCTTCATGGATGAACCCACTTCTGGATTGGATGCCCGGGCTGCAGCCATTGTGATGAGAACTGTGAGGAATATAGTGAATACTGGGCGAACAATTGTGTGCACGATCCATCAGCCTAGCATAGACATATTTGAATCCTTTGATGAGCTTCTGTTTATGAAAAGGGGAGGAGAGCTCATTTATGCTGGTCCACTTGGCCCTAAATCGAGTGAACTAATTAGTTATTTCGAGGCAATCGAAGGAGTTCCAAAGATCAGGTCTGGATATAACCCTGCTACGTGGATGCTGGAGGCTACTTCTTCAGTTGAAGAAAACAGATTGGGAGTGGACTTTGCAGAAATCTACAGAAAATCAAGTTTATATCAATATAACCAAGAGTTGGTTGAAAGGTTGAGCAAGCCTAGTGGTAATTCAAAAGAATTGCATTTTCCAACCAAGTATTGCCGGTCATCTTTTGAGCAGTTCCTAACTTGTCTATGGAAGCAAAATCTTTGTTACTGGCGTAACCCTCAGTACACTGCTGTTCGCTTTTTTTACACTGTCATAATCTCATTGATGCTTGGGTCAATATGCTGGAGATTTGGTGCTAAAAGGGAAACGCAGCAAGATCTATTCAATGCCATGGGATCGATGTATTCGGCAATCCTCTTCATTGGTATAACAAATGGCACAGCTGTTCAGCCTGTTGTTTCTGTGGAAAGATTTGTTTCTTATAGAGAAAGAGCTGCAGGGATGTATTCGGCTTTATCATTTGCATTTGCTCAGGTTGTGATTGAGTTCCCTTATGTGTTCGCACAAGCTATTATATACTCTTCAATATTCTATTCCATGGCTTCCTTTCTCTGGACTTTTGATCGGTTCATTTGGTACTTATTCTTCATGTATTTTACGATGTTATATTTTACCTTCTATGGAATGATGACAACGGCTGTCACACCAAATCATAACGTTGCTGCCATCATTGCTGCTCCATTTTATATGTTGTGGAACCTTTTCAGTGGTTTTATGATTCCTCACAAGAGGATCCCTATTTGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCATGGAGTCTGTATGGTCTGCTAACTTCACAGTATGGTGGCGATACTCATTTAGTGAAGCTCTCTGATGGAAACTCGATGACTATAAGAGAGGTACTCAAACACGTGTTTGGGTACAGGCATGATTTCTTGTGCGTTACTGCTGTTATGGTGGCGGGCTTCTGCATATTTTTTGGAGTTATATTTTCATTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA | 4257 | 0.4296 | MWNSAENAFARSSSFREETEDEEALRWAALERLPTYKRARRGIFKNVIGDIKEIDVRDLQAQEQRLLLERLVDCVDNDPERFFQRMRSRFDAVGLHFPKIEVRFQDLTVETYVHVGSRALPTIPNFICNMTEALLRQLRMYRRKRSKLTILADISGIIKPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGNITYNGHSLKEFVPQRTSAYVSQQDRHVAEMTVRETLQFAGRCQGVGFKFDMLLELARREKNAGIKPDEDLDLFMKSLALGGQETNLVVEYIMKILGLDICGDTLVGDEMLKGISGGQKKRLTTGELLIGPARVLFMDEISTGLDSSTTYQIIRYLKHSTRALDGTTIVSLLQPAPETYELFDDVILLCEGQIVYQGPREAAVDFFKQMGFSCPERKNVADFLQEVTSKKDQEQYWSVPDRPYRYVPVGKFAEAFSLYREGRILSEQLNLPFDRRYNHPAALATVSYGAKRLELLKTNYQWQKLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHHNTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTLPSWFLSIPTSLIEAGCWVTVSYYASGYDPAFTRFLRQFLLFFFLHQMSIGLFRLIGSLGRNMIVSNTFGSFAMLVVMALGGYIISRDRIPVWWIWGFWISPLMYAQNSASVNEFLGHSWDKKAGNQTTYSLGEAVLKERSLYAENYWYWIGLGAMVGYTILFNILFTIFLAYLNPLGRQQAVVSKDELQEREKRRKGESVVIELREYLQRSASSGKHFKQRGMVLPFQPLSMAFSNINYYVDVPLELKQQGIVEDKLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGVIEGSVYISGYPKRQDSFARISGYCEQTDVHSPCLTVWESLLFSAWLRLSSDVDFETQKAFVEEVMELVELTPLSGALVGLPGIDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSSELISYFEAIEGVPKIRSGYNPATWMLEATSSVEENRLGVDFAEIYRKSSLYQYNQELVERLSKPSGNSKELHFPTKYCRSSFEQFLTCLWKQNLCYWRNPQYTAVRFFYTVIISLMLGSICWRFGAKRETQQDLFNAMGSMYSAILFIGITNGTAVQPVVSVERFVSYRERAAGMYSALSFAFAQVVIEFPYVFAQAIIYSSIFYSMASFLWTFDRFIWYLFFMYFTMLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWSLYGLLTSQYGGDTHLVKLSDGNSMTIREVLKHVFGYRHDFLCVTAVMVAGFCIFFGVIFSFAIKSFNFQRR* | 1419 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1012 | 1418 | SMART | AAA_5 | 160 | 385 | IPR003593 | - | |
Gso17g1012 | 1418 | SMART | AAA_5 | 854 | 1046 | IPR003593 | - | |
Gso17g1012 | 1418 | Gene3D | - | 135 | 433 | IPR027417 | - | |
Gso17g1012 | 1418 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 9 | 1418 | - | - | |
Gso17g1012 | 1418 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 830 | 1053 | IPR027417 | - | |
Gso17g1012 | 1418 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 817 | 1070 | IPR003439 | GO:0005524 | |
Gso17g1012 | 1418 | CDD | ABCG_PDR_domain2 | 814 | 1052 | IPR034003 | - | |
Gso17g1012 | 1418 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 135 | 408 | IPR003439 | GO:0005524 | |
Gso17g1012 | 1418 | Pfam | ABC-transporter N-terminal | 76 | 126 | IPR029481 | - | |
Gso17g1012 | 1418 | Pfam | Plant PDR ABC transporter associated | 704 | 768 | IPR013581 | - | |
Gso17g1012 | 1418 | Pfam | ABC transporter | 152 | 333 | IPR003439 | GO:0005524 | |
Gso17g1012 | 1418 | Pfam | ABC transporter | 846 | 997 | IPR003439 | GO:0005524 | |
Gso17g1012 | 1418 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 146 | 408 | IPR027417 | - | |
Gso17g1012 | 1418 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 32 | 9 | 1418 | - | - | |
Gso17g1012 | 1418 | Pfam | ABC-2 type transporter | 489 | 699 | IPR013525 | GO:0016020|GO:0140359 | |
Gso17g1012 | 1418 | Pfam | ABC-2 type transporter | 1142 | 1355 | IPR013525 | GO:0016020|GO:0140359 | |
Gso17g1012 | 1418 | Pfam | ABC-2 type transporter | 366 | 419 | IPR043926 | GO:0140359 | |
Gso17g1012 | 1418 | Gene3D | - | 830 | 1060 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1012 | Gso-Chr17 | 9529453 | 9540666 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1012 | 842 | 1029 | Calmodulin-binding Proteins | AT2G36910 | 26.042 | 1.39e-06 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1012 | K08711 | - | gmx:100785375 | 2794.61 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso17g1012 | 17 | 9529453 | 9540666 | Gso17g1012 | 17 | 9529453 | 9540666 | ECH |