Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1009 ATGGCGTTGTTCATTACTGTTGTTGTTGTTTTGTTCCTGCTGCAGCTGAGTTCGAGTGTCCGAGTGAACTCGGAGCCGACTCAGGACAAGCAAGCCCTCCTCTCTTTCCTCTCCCAAACCCCACACTCGAACCGTCTCCAATGGAACGCTTCGGAATCCGCGTGCGACTGGGTGGGCGTGAAATGCGACGCGTCACGCTCCTTCGTCTACTCGCTCCGTTTACCCGCCGTCGATTTAGTGGGTCGGGTCCCACCCGGTACACTCGGCCGCTTAACCCAGCTTCGGATCCTCAGCCTCCGCTCCAACGCCCTCACCGGCGAGATCCCTTCCGATTTCTCCAACCTCATTTTCCTCCGCAGCCTCTACCTCCAGAAGAACCAATTCTCCGGCGAGTTCCCTCCGAGTCTCACTCGCCTCACTCGCTTGGCTCGCTTGGATCTTTCCTCCAACAATTTCACCGGCCAAATCCCTTTCTCTGTTAACAACTTAACCCACCTCACTGGCCTCTTCTTAGAACGCAACCATTTCTCCGGTAAAATCCCTAGCATCACTCTCAGGCTTGTTAACTTCAATGTTTCATATAACAATCTCAACGGTTCAATCCCCGAGACACTCTCTGCGTTTCCGGAAACTTCCTTCGTCGGAAACATAGATCTCTGCGGACCGCCGTTGAAGGACTGTACTCCTTTCTTCCCGGCGCCGGCGCCGTCTCCGTCGGAGAATTCAACCCCGGTGAAGACACGTAAGAAGTCCAAGAAGCTCTCCACCGGCGCCATTGTTGCAATCGTTGTGGGGTCCGTTCTTGGCTTGGCGTTGTTGCTGCTGCTGCTGTTGCTGTGTCTCCGGCGGCGGCGAAGACAGCCCGCGAAGCCGCCGAAGGCGGTGGTGGAGGAGCATAGCGTGCCGGCGGAGGCGGGGACGTCGTCGTCGAAGGATGATATCACCGGGGGTTCGGCGGAGGTGGAGAGGAACAAGCTTGTGTTCTTCGAAGGGGGAATTTACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAGGGTAGCGTGGGGACTTCGTATAAGGCGGTGCTGGAGGAAGGAACCACCGTGGTGGTGAAGAGGCTGAAGGATGTTGTGGTGACGAAGAAAGAGTTCGAGACGCAAATGGAGGTTCTGGGGAATATTAAGCACGAGAATGTGGTTCCTCTCAGAGCCTTCTACTTCTCCAAGGACGAGAAATTGCTCGTTTATGATTACATGTCCGCTGGGAGCTTGTCTGCGCTGCTACACGGGAGCAGAGGGTCTGGGCGAACACCACTCGACTGGGACAGCCGAATGAAAATAGCCCTAGGAGCAGCAAGAGGGCTGACATGCCTCCATGTGGCAGGCAAGGTGGTCCACGGCAACATCAAATCTTCCAACATCCTCCTCCGGGGACCCGACCATGATGCCGGCGTTTCGGACTTCGGCCTCAACCCCTTGTTCGGAAACGGAGCCCCGTCAAACCGTGTGGCGGGATACCGGGCACCCGAAGTGGTCGAAACCCGGAAGGTGAGCTTCAAGTCCGACGTGTACAGCTTGGGAGTGTTGCTGCTGGAGCTTCTAACGGGAAAAGCGCCAAACCAAGCCTCGCTCGGGGAAGAGGGCATTGATCTTCCCAGGTGGGTTCAGTCAGTTGTGCGTGAAGAATGGACCGCAGAAGTGTTCGATGCGGAGCTCATGAGGTTCCAAAACATCGAGGAGGAGATGGTTCAACTGTTGCAAATTGCTATGGCGTGCGTTTCCGTTGTGCCGGATCAGAGGCCTAGCATGCAAGACGTGGTGCGTATGATTGAGGACATTAACCGTGGCGAGACAGATGATGGCTTGAGACAATCTTCTGATGACCCTTCCAAAGGATCCGAGGGTCACACACCACCCCCAGAGTCAAGGACTCCACCTAGGTCACTCACACCTTAA 1953 0.5576 MALFITVVVVLFLLQLSSSVRVNSEPTQDKQALLSFLSQTPHSNRLQWNASESACDWVGVKCDASRSFVYSLRLPAVDLVGRVPPGTLGRLTQLRILSLRSNALTGEIPSDFSNLIFLRSLYLQKNQFSGEFPPSLTRLTRLARLDLSSNNFTGQIPFSVNNLTHLTGLFLERNHFSGKIPSITLRLVNFNVSYNNLNGSIPETLSAFPETSFVGNIDLCGPPLKDCTPFFPAPAPSPSENSTPVKTRKKSKKLSTGAIVAIVVGSVLGLALLLLLLLLCLRRRRRQPAKPPKAVVEEHSVPAEAGTSSSKDDITGGSAEVERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGNIKHENVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMKIALGAARGLTCLHVAGKVVHGNIKSSNILLRGPDHDAGVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRTPPRSLTP* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1009 650 Gene3D Transferase(Phosphotransferase) domain 1 418 630 - -
Gso17g1009 650 SUPERFAMILY L domain-like 27 208 - -
Gso17g1009 650 Gene3D Ribonuclease Inhibitor 186 230 IPR032675 -
Gso17g1009 650 ProSiteProfiles Protein kinase domain profile. 343 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1009 650 Pfam Protein kinase domain 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1009 650 MobiDBLite consensus disorder prediction 611 650 - -
Gso17g1009 650 PANTHER OS05G0588300 PROTEIN 11 630 - -
Gso17g1009 650 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gso17g1009 650 SUPERFAMILY Protein kinase-like (PK-like) 347 612 IPR011009 -
Gso17g1009 650 MobiDBLite consensus disorder prediction 611 629 - -
Gso17g1009 650 MobiDBLite consensus disorder prediction 290 316 - -
Gso17g1009 650 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Gso17g1009 650 Gene3D Phosphorylase Kinase; domain 1 311 417 - -
Gso17g1009 650 PANTHER OS05G0480400 PROTEIN 11 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1009 Gso-Chr17 9501184 9504638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1009 4 630 Receptor kinase-like Gene Family AT5G58300 52.433 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso17g1009 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1009 - - gmx:102662178 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1009 17 9501184 9504638 Gso17g1009 17 9501184 9504638 ECH