Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0999 ATGTTGGTGTGCGGCCAAGACGAGATTGACTTGTCTAGAGATGGCAGCCACTACAGTCTCTCTACTGGGATACTACCTTCCCTTGGAGCCAAAAGTAACCGCAGACTTAAGCTCAAGCCCTTCATTGTTTCTCCCTATGACCGCCGTTACAGGATATGGGAAACTTTCCTTGTTATTCTGGTGGTTTACACTGCTTGGGTTTCTCCCTTTGAATTCGGATTCCTGAAGAAACCACAAGCACCCCTTTCCATAACCGATAACATTGTCAATGGATTTTTTTTCGTGGATATAGTTCTGACCTTCTTCGTGGCTTACATTGACAAAAGCAGCTATTTGATCGTGGATGACCGAAAACAAATTGCTTGGAAATATGCAAGGACTTGGTTGTCCTTTGATGTTATCTCCATCATTCCTTCTGAGCTTGTACAAAAGATATCACCTTCTCCTCTTCAATCTTATGGCCTATTCAACATGCTTAGGCTTTGGCGTCTTCGAAGAGTTGGTGCATTGTTTTCTCGGCTTGAGAAGGACAAAAATTATAACTATTTTTGGGTTCGATGCGCTAAGCTCATTGCTGTTACCCTCTTCGCTGTCCATTGTGCTGCATGTTTCTATTATCTTATTGCTGCTCGTTATCATGATCCCAAAAAGACATGGATTGGTGCAACGATGGATAATTTCCTTGAACACAGCTTGTGGTCAAGATACGTGACATCTATTTACTGGTCCATTACTACCTTAACAACTGTTGGTTATGGAGATTTGCATCCTGTGAATTCAAGGGAGATGATCTTTGACGTCTTTTATATGCTCTTTAATCTGGGTTTAACAGCATATTTGATTGGTAATATGACCAACTTGGTTGTCCATGGCACAAGTCGAACCAGAAAATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCCCAAAGGAACCAATTGCCACATCGGTTGCAAGACCAAATGCTTGCACACTTGTGTTTGAAGTATAGAACAGACTCAGAAGGGTTGCAACAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATCAGATCGAGCATTTCACATTATCTTTTTTATTCTCTGATTGACAAGGTCTACTTGTTTCATGGGGTTTCAAATGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCAGAATATTTTCCACCCAAAGAAGATGTTATCTTGCAAAACGAAGCCCCCACTGACTTTTATATACTGGTCACTGGTGCCGTGGAACTACTAGTTCTTAAAAATGGGGCTGAACAGGTTGTTGGAGAGGCCAAAACTGGTGATCTTTGTGGTGAGATTGGTGTGCTTTGTTATAAGCCACAGCTTTTCACAGTTCGAACGAAGCGACTAAGTCAGTTGCTCAGGCTAAACCGTACTACGTTCTTGAATATTGTTCAGGCCAACGTGGGAGATGGAACCATAATAATGAATAATCTCCTTCAGCATTTGAAAGAGATCAACGATCCAATCATGGAGGGAGTTTTGGTGGATATTGAGAACATGTTAGCTCGTGGTAGGATGGACCTACCAGTGAGTGTGTGCTTTGCGGCAGCAAGAGGAGATGACTTGTTGTTGCATCAATTACTCAAACGAGGCATGGATCCAAATGAATCCGACAACAATCGAAGGACAGCTTTGCATATAGCGGCATCTCAAGGAAAACAGAACTGTGTTTTGCTTCTGTTAGACTATGGGGCGGATCCCAACATTAGAGATTTGGAAGGTAATGTGCCACTATGGGAGGCTATAGTGGGAGGACATGAATCAATGAGCAAGCTGTTATCAGAGAATGGAGCAAATTTGCAATGCGGGGATGTGGGCCAATTTGCATGTACTGCCGCTGAACAAAACAGCCTCAACTTGCTGAAGGAAATAATGCGCTACGGAGGAGATATCACGCTTCCAAACAGCAGCAACACAGGGACCACAGCTTTGCACGTTGCAGTCTCTGAAGGCAACGTTGAGACTGTCAAATTCCTTTTGGATCACGGGGCGAGTATTGACATGCCAGACAAGCATGGCTGGACCCCAAGAGATCTTGCAGATCAGCAGGCACATACAGAAATCAAAGCCCTTTTTGATTCCATTGGGGAGCCTAAGGTCCATTCTTCCGTCGCTATTCCGGTGAGGAATAGCAAGATCAAGTACCTTGGTAGGTTCACAAGTGAGCCAACCATGACATTGCCTCTTGATGGATCGTTTCATGGAACTGATGGCTCTTGGAGCCAGAACCAGAGCCAAAACCAGAGCCGGCCGAGGCGTCGGAGCAACAACTACCATAACTCTCTGTTCGGGATATTGTCAGCAGCACACAATGGGGAAAAGTACCTGCTTTCAGCTGTTGACATGAATAACAATGCAAGGAATGGTATGAAGAGTAGTAGTGCAGTTGGTCCAACTAGAGTTATAATTAGTTGTCCTGAGAAGGGTGAGGTTGTTGGGAAGCTTGTTTTACTGCCTGGAAGCTTTCAAGAGCTAGTTGAGATTGGAGCCAAGAAATTTGGTTTCTATCCTAATAAGGTTGTATGCAAAGATGGAGGTGAAATTGAAGATATAGAGATAATTAGGGATGGTGACCATCTTGTTTTTCTTGGTGCAAGTGGAGGGTGCTAG 2628 0.4365 MLVCGQDEIDLSRDGSHYSLSTGILPSLGAKSNRRLKLKPFIVSPYDRRYRIWETFLVILVVYTAWVSPFEFGFLKKPQAPLSITDNIVNGFFFVDIVLTFFVAYIDKSSYLIVDDRKQIAWKYARTWLSFDVISIIPSELVQKISPSPLQSYGLFNMLRLWRLRRVGALFSRLEKDKNYNYFWVRCAKLIAVTLFAVHCAACFYYLIAARYHDPKKTWIGATMDNFLEHSLWSRYVTSIYWSITTLTTVGYGDLHPVNSREMIFDVFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPHRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLIDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELLVLKNGAEQVVGEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKEINDPIMEGVLVDIENMLARGRMDLPVSVCFAAARGDDLLLHQLLKRGMDPNESDNNRRTALHIAASQGKQNCVLLLLDYGADPNIRDLEGNVPLWEAIVGGHESMSKLLSENGANLQCGDVGQFACTAAEQNSLNLLKEIMRYGGDITLPNSSNTGTTALHVAVSEGNVETVKFLLDHGASIDMPDKHGWTPRDLADQQAHTEIKALFDSIGEPKVHSSVAIPVRNSKIKYLGRFTSEPTMTLPLDGSFHGTDGSWSQNQSQNQSRPRRRSNNYHNSLFGILSAAHNGEKYLLSAVDMNNNARNGMKSSSAVGPTRVIISCPEKGEVVGKLVLLPGSFQELVEIGAKKFGFYPNKVVCKDGGEIEDIEIIRDGDHLVFLGASGGC* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0999 875 ProSiteProfiles Ankyrin repeat region circular profile. 645 677 - -
Gso17g0999 875 SMART cnmp_10 368 485 IPR000595 -
Gso17g0999 875 PANTHER POTASSIUM CHANNEL AKT1 10 870 IPR045319 GO:0005249|GO:0006813
Gso17g0999 875 ProSiteProfiles Ankyrin repeat profile. 645 677 IPR002110 GO:0005515
Gso17g0999 875 SUPERFAMILY Voltage-gated potassium channels 45 289 - -
Gso17g0999 875 SMART ANK_2a 610 639 IPR002110 GO:0005515
Gso17g0999 875 SMART ANK_2a 579 608 IPR002110 GO:0005515
Gso17g0999 875 SMART ANK_2a 645 674 IPR002110 GO:0005515
Gso17g0999 875 SMART ANK_2a 546 575 IPR002110 GO:0005515
Gso17g0999 875 SMART ANK_2a 513 542 IPR002110 GO:0005515
Gso17g0999 875 ProSiteProfiles Ankyrin repeat profile. 579 611 IPR002110 GO:0005515
Gso17g0999 875 ProSiteProfiles Ankyrin repeat profile. 546 578 IPR002110 GO:0005515
Gso17g0999 875 Pfam Ankyrin repeats (many copies) 642 686 IPR002110 GO:0005515
Gso17g0999 875 Gene3D Jelly Rolls 332 492 IPR014710 -
Gso17g0999 875 MobiDBLite consensus disorder prediction 741 762 - -
Gso17g0999 875 SUPERFAMILY Ankyrin repeat 519 700 IPR036770 -
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 63 70 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 86 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 97 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 236 253 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 262 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PRINTS EAG/ELK/ERG potassium channel family signature 280 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso17g0999 875 PANTHER K+ TRANSPORTER 1-RELATED 10 870 - -
Gso17g0999 875 Pfam Ion transport protein 51 295 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso17g0999 875 MobiDBLite consensus disorder prediction 733 762 - -
Gso17g0999 875 CDD CAP_ED 368 473 IPR000595 -
Gso17g0999 875 SUPERFAMILY cAMP-binding domain-like 293 488 IPR018490 -
Gso17g0999 875 ProSiteProfiles cAMP/cGMP binding motif profile. 368 470 IPR000595 -
Gso17g0999 875 Pfam KHA, dimerisation domain of potassium ion channel 806 868 IPR021789 -
Gso17g0999 875 ProSiteProfiles KHA domain profile. 806 875 IPR021789 -
Gso17g0999 875 Gene3D - 52 289 - -
Gso17g0999 875 Gene3D - 514 700 IPR036770 -
Gso17g0999 875 ProSiteProfiles Ankyrin repeat region circular profile. 546 577 - -
Gso17g0999 875 Pfam Cyclic nucleotide-binding domain 388 472 IPR000595 -
Gso17g0999 875 Pfam Ankyrin repeats (3 copies) 520 607 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0999 Gso-Chr17 9377452 9384298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0999 11 868 Ion Channels AT2G25600 63.908 0.0 1111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0999 K21867 - gmx:100781642 1735.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0999 17 9377452 9384298 Gso17g0999 17 9377452 9384298 ECH