Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0995 ATGGAGGACAGAAAAGCCAACACAATCTCTGTAATATCAGTGATTGCACTGATCATCCTCATCATCGTCGCTCGTGTTTCCTTGAAGCTCTCGCGTGCCTTCTTCCTCATATGTGGCGCTTCTATTGCTGTGATCCTCGCTGTCTTTTCTTGTGCACTCATAAGGCACCGTTACAACCACAGAAGGAGGTTGTTGGAGTCACAGTTGAAGACAGAAGGGAGAGAGCTTCGAATAGAGTACAGTTTCCTAAGAAAAGTTGCTGGTGTTCCCACAAAGTATCGTTTCAAGGAGCTTGAAGAAGCAACGGATGGTTTTCAAGCACTTTTAGGAAAAGGGTCCTCTGCTTCGGTCTTCAAAGGCATTCTCAACGATGGAACTTCGGTTGCGGTGAAACGAATCGACGGCGAGGAGCGAGGGGAGAAAGAATTCAGATCAGAAGTTGCAGCCATTGCAAGTGTGCATCATGTCAACCTCGTACGTATGTTTGGTTATTGTAACGCTCCAACAGCACCTAGGTACCTTGTTTATGAGTACATCCCAAACGGGTCCTTGGATTGTTGGATTTTTCCCTTAAGGGAAAATCATACACGTAAAGGAGGGTGTTTACCGTGGAACTTGAGGCAAAAGGTAGCTATTGATGTTGCAAGAGGGTTGTCTTATCTTCACCATGATTGTAGGAGGAGGGTTTTGCATCTTGATGTGAAGCCAGAGAATATACTCTTGGATGAGAATTACAAGGCTCTTGTTGCTGATTTTGGTCTCTCAACGCTTGTTGGAAAGGATGTGAGTCAGGTTATGACAACAATGAGAGGGACAAGAGGGTACTTGGCTCCTGAGTGGCTTTTGGAAAGAGGGGTGTCAGAAAAAACTGATGTTTACAGCTATGGGATGGTTCTGTTGGAGATCATTGGAGGGAGAAGGAATGTGTCGAGGGTAGAGGATCCGAGGGACAGGACCAAGAAAAAGTGGGAGTTTTTTCCCAAGATTGTGAATGAGAAAGTGAGGGAAGGGAAATTCATGGAGATTGTGGATCGTAGGTTGGTGGAGCGTGGGAGTGTTGTTGAGGAGAGTGAGGTTACTAGGTTGGTGTATATTGCATTGTGGTGCATACAAGAGAAGCCAAGGTTGAGGCCTAGCATGGCACAAGTGGTTGACATGCTTGAAGGGCGTGTGAGGGTGGATGAACCACCTGGTTCAAGAATGATTCTTGTTGATTTGCTTGCTGTTGATGAAGATCCTGCAGATCATAGAAATTTGGCAAGGTTGTTGACATCTGTGTCCAGCCATGTGGATTGTACATCTACTTACTCTTTGGGAACCACAAACACTATTTTATCTGGTAGATAG 1347 0.4543 MEDRKANTISVISVIALIILIIVARVSLKLSRAFFLICGASIAVILAVFSCALIRHRYNHRRRLLESQLKTEGRELRIEYSFLRKVAGVPTKYRFKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGEKEFRSEVAAIASVHHVNLVRMFGYCNAPTAPRYLVYEYIPNGSLDCWIFPLRENHTRKGGCLPWNLRQKVAIDVARGLSYLHHDCRRRVLHLDVKPENILLDENYKALVADFGLSTLVGKDVSQVMTTMRGTRGYLAPEWLLERGVSEKTDVYSYGMVLLEIIGGRRNVSRVEDPRDRTKKKWEFFPKIVNEKVREGKFMEIVDRRLVERGSVVEESEVTRLVYIALWCIQEKPRLRPSMAQVVDMLEGRVRVDEPPGSRMILVDLLAVDEDPADHRNLARLLTSVSSHVDCTSTYSLGTTNTILSGR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0995 448 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Gso17g0995 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Gso17g0995 448 PANTHER RECEPTOR-LIKE KINASE 1 448 - -
Gso17g0995 448 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0995 448 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 448 - -
Gso17g0995 448 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Gso17g0995 448 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0995 448 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Gso17g0995 448 ProSiteProfiles Protein kinase domain profile. 103 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0995 448 SUPERFAMILY Protein kinase-like (PK-like) 86 388 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0995 Gso-Chr17 9291909 9293620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0995 1 399 Receptor kinase-like Gene Family AT5G20050 64.428 6.61e-180 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso17g0995 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0995 - - gmx:100779485 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0995 17 9291909 9293620 Gso17g0995 17 9291909 9293620 ECH
Gso17g0995 17 9291909 9293620 Gso6g1826 6 22389407 22391417 PCT
Gso6g1826 6 22389407 22391417 Gso17g0995 17 9291909 9293620 PCT