Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0982 ATGGCTGCTCTCTTGAGGAGGTTTGCGAGCGCCACTCCGATCCCATCCAATTCCTCTCACACCAATCTCCGCCTTCCCTTCACCGCCATCGCCGCCATTTCCGGCGGAGTCTCCTTCCTTTTCTACCATTCCTCTCCCAACTTCGCTCATTCACAAGAAGCAGAACAAGTGGAAAGTAAAAACATCGCACTCGTTCCGGATAAATGGGTCGAGTTTAAGTTGCAGGATACTGCTAGGGTTAGTCACAATACCCAGCTATTCAGGTTTTCATTTGATCCCACTCAGAAATTGGGTCTGGATATTGCTTCTTGCATCCTTACAAGGGCTCCATTGGGACAAGATGCTGAAGGAAAACCAAAATTTGTCATACGCCCGTACACTCCTATTTCAGATCCAGAATCAAATGGCTATTTTGATTTGCTAATCAAGGTATATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTAAAACCGGGTGATGTTGTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAGCATATTGGCATGATTGCTGGAGGCACAGGAATTACTCCTATGCTTCAGGTAATTGAAGCTATATTGAGGAATCCTGATGACAAAACTCAGATATCTTTACTTTATGCTAATGTCTCCCCGGATGACATACTGCTTAAACAAAAGCTTGACATTCTTGCAACAAGCCACCCAAACTTAAAGATATTCTACACTGTAGATAATCCAACGAAAAATTGGAGAGGAGGTGCAGGTTACATATCAAAGGATGTGGTTGTGAAAGGCTTACCCAGTCCTAGTGATGATACTCTAATACTTGTGTGTGGACCCCCGGGTATGATGAAAGCAATATCTGGAGAAAAGGCCAAGGACTGGACACAAGGAGAGGTTTCTGGCATCCTAAAAGAGGCTGGATACACTGAACAAATGGTATACAAATTCTGA 960 0.4365 MAALLRRFASATPIPSNSSHTNLRLPFTAIAAISGGVSFLFYHSSPNFAHSQEAEQVESKNIALVPDKWVEFKLQDTARVSHNTQLFRFSFDPTQKLGLDIASCILTRAPLGQDAEGKPKFVIRPYTPISDPESNGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILRNPDDKTQISLLYANVSPDDILLKQKLDILATSHPNLKIFYTVDNPTKNWRGGAGYISKDVVVKGLPSPSDDTLILVCGPPGMMKAISGEKAKDWTQGEVSGILKEAGYTEQMVYKF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0982 319 Pfam Oxidoreductase NAD-binding domain 184 290 IPR001433 GO:0016491
Gso17g0982 319 Pfam Oxidoreductase FAD-binding domain 72 174 IPR008333 -
Gso17g0982 319 PANTHER NADH-CYTOCHROME B5 REDUCTASE 31 319 IPR001834 GO:0016491
Gso17g0982 319 SUPERFAMILY Riboflavin synthase domain-like 62 177 IPR017938 -
Gso17g0982 319 CDD cyt_b5_reduct_like 72 319 - -
Gso17g0982 319 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 31 319 - -
Gso17g0982 319 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 161 317 IPR039261 -
Gso17g0982 319 PRINTS Cytochrome B5 reductase signature 124 131 - -
Gso17g0982 319 PRINTS Cytochrome B5 reductase signature 160 174 - -
Gso17g0982 319 PRINTS Cytochrome B5 reductase signature 183 202 - -
Gso17g0982 319 PRINTS Cytochrome B5 reductase signature 221 232 - -
Gso17g0982 319 PRINTS Cytochrome B5 reductase signature 276 284 - -
Gso17g0982 319 Gene3D - 166 319 IPR039261 -
Gso17g0982 319 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 67 175 IPR017927 GO:0016491
Gso17g0982 319 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 124 131 IPR001709 GO:0016491
Gso17g0982 319 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 183 202 IPR001709 GO:0016491
Gso17g0982 319 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 221 232 IPR001709 GO:0016491
Gso17g0982 319 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 276 284 IPR001709 GO:0016491
Gso17g0982 319 Gene3D Translation factors 62 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0982 Gso-Chr17 9206708 9212667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0982 58 319 NADPH P450 reductases AT5G17770 41.667 1.26e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0982 K00326 - gmx:100819222 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0982 17 9206708 9212667 Gso17g0982 17 9206708 9212667 ECH