Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g0927 | ATGGCTATCACTGTGTTGTTCTTGGTGCTGTTGCTGCAATTGTGGACAGTTTTTGGCTCTGAGGTTGTCCTACAGTCAAGGGATTGTGACTCTGATTGGGTGGCACATTCGTATTCTAGTCATGGTCAGGATCTGTTCTACATAAACGGCAATGTAGTGAACAAAGTTGCTTTCTGTGAGGCTCTCCAATTGTATATTGCAAAGGGGTGTGATGTGAAGGACTACTTTGGAAGTGTCAAATGTGTGGTGGATGACTCTTTTGTGAATTTACCTTTAAAGGCAGGGAGGAAACTTTTGAAGGATTTGAGCAATGAATCCACACCACGAGGAGATTCTAATCCTGTGTCATCCAAAGTAGTTGTTATTGGTGCGGGGGGAGCTTTGTTGGTGTGTTGTGCTGTTCTTTGTCCTTGTTTCTATGCCAAGAGACGTAAAGCAACTTCTCATGCTGTTCTGGCCAAGGACCCAAATTCAATGGATTCGGTTTCCTCCTTCGAAGCCTCCACTAATGATAAGATTCCAGCCAGTCCACTTCGGGTGCCACCTAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCACTAGACTTAAATCGTTGCATCTCAATCTGAACCAAGTTACAAGAGCTACCCAAAACTTCTCAGAAACATTACAAATAGGAGAGGGAGGTTTTGGAACTGTCTACAAGGCCAAGTTGGAAGATGGCCGGGTTGTGGCTGTAAAACGTGCAAAAAAGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAGTGAAATTGAACTTTTGGCCAAAATTGATCACCGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAACGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTACCCTTAGAGAACATTTGGATGGTATGCGTGGAAAAATCCTAGACTTCAATCAGCGCCTTGAAATTGCAATTGATGTTGCTCATGGCCTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATTCATCGAGATGTGAAATCATCCAATATTCTTCTGACAGAAAGCATGCGAGCCAAAGTTGCTGATTTTGGATTTGCAAGGCTAGGACCAGTGAACACTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTCGGTTATTTGGACCCTGAGTATATGAAAACATACCAACTCACTCCCAAGAGTGACGTTTATTCATTTGGAATTTTGCTTTTAGAAATTGTGACAGGCCGCCGTCCTGTTGAGTTGAAGAAAACTGTTGAAGAGCGGGTTACACTCAGATGGGCCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTGGTGGATCCTCTAATGGAAGAAGCTGTAAACGGAGATGTTCTGATGAAAATGTTTGATTTGGCGTTTCAATGTGCAGCCCCCATTCGAACAGATAGACCTGACATGAAATCAGTGGGCGAACAATTGTGGGCTATAAGGGCAGATTACCTCAAGAGTGCAAGGAGAGAATAA | 1500 | 0.4293 | MAITVLFLVLLLQLWTVFGSEVVLQSRDCDSDWVAHSYSSHGQDLFYINGNVVNKVAFCEALQLYIAKGCDVKDYFGSVKCVVDDSFVNLPLKAGRKLLKDLSNESTPRGDSNPVSSKVVVIGAGGALLVCCAVLCPCFYAKRRKATSHAVLAKDPNSMDSVSSFEASTNDKIPASPLRVPPSPSRFSMSPKLTRLKSLHLNLNQVTRATQNFSETLQIGEGGFGTVYKAKLEDGRVVAVKRAKKEHFDSLRTEFSSEIELLAKIDHRNLVKLLGYIDKGNERLLITEFVPNGTLREHLDGMRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELKKTVEERVTLRWAFRKYNEGSVVELVDPLMEEAVNGDVLMKMFDLAFQCAAPIRTDRPDMKSVGEQLWAIRADYLKSARRE* | 500 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g0927 | 499 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 334 | 346 | IPR008271 | GO:0004672|GO:0006468 | |
Gso17g0927 | 499 | PANTHER | NODULATION RECEPTOR KINASE-LIKE PROTEIN | 12 | 498 | - | - | |
Gso17g0927 | 499 | Pfam | Protein tyrosine and serine/threonine kinase | 218 | 485 | IPR001245 | GO:0004672|GO:0006468 | |
Gso17g0927 | 499 | ProSiteProfiles | Protein kinase domain profile. | 213 | 487 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso17g0927 | 499 | ProSitePatterns | Protein kinases ATP-binding region signature. | 219 | 245 | IPR017441 | GO:0005524 | |
Gso17g0927 | 499 | Gene3D | Transferase(Phosphotransferase) domain 1 | 290 | 498 | - | - | |
Gso17g0927 | 499 | SMART | serkin_6 | 213 | 487 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso17g0927 | 499 | SUPERFAMILY | Protein kinase-like (PK-like) | 196 | 488 | IPR011009 | - | |
Gso17g0927 | 499 | CDD | STKc_IRAK | 219 | 485 | - | - | |
Gso17g0927 | 499 | PANTHER | OS07G0166700 PROTEIN | 12 | 498 | IPR045272 | GO:0004714|GO:0006468 | |
Gso17g0927 | 499 | Gene3D | Phosphorylase Kinase; domain 1 | 184 | 289 | - | - | |
Gso17g0927 | 499 | MobiDBLite | consensus disorder prediction | 163 | 187 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g0927 | Gso-Chr17 | 8606876 | 8611270 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g0927 | 198 | 488 | Receptor kinase-like Gene Family | AT5G59700 | 46.048 | 3.04e-74 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IV | Gso17g0927 | PK_Tyr_Ser-Thr | 1.6e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g0927 | - | - | gmx:100798260 | 968.763 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso17g0927 | 17 | 8606876 | 8611270 | Gso17g0927 | 17 | 8606876 | 8611270 | ECH |