Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0901 ATGTTGCGAGTGAAGGGAGGGAAGAGACCACCTTGGGTGGGACTTGGAGCTGCAGTGTGGGTTCAGATTGCTTCAGGAAATGGTTACTGTTTCCCTCTCTATTCCCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACCCTTCTTGGTGTTGCCAATGATATTGGTGAGAATGTTGGCATTCTTCCCGGACTCGCCTGCAACAAGTTTCCTCCTTGGCTCATTCTCTTCATCGGTGCTCTCTTTTCTTTCCTTGGTTTTGGTGTTCTCTGGCTTGCTATCACCAAAACACTTGATTCTCTTCCTTTCATCTTGCTATGGTTTGCACTTGCTGTTGCTACCAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAATCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACTCAAATTTACAGCGTGGTTTTTCACAATTCTTCATCCAAGTTCCTTTTGTTTCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGTACTCCTGCTTCTGGTGATGATTCTGCTGAAAAGGGGCATTTTTTGTTTATCCAAGGTGCTAGTGTGGCCATGGGTTTATATATTCTTGCTACAACTCTACTTGACAACTTTATCCACATAAGGGACAGTGTTTCATATGCTTTGTTGGCTGTGATGATTCTTCTTCTCTTGGCTCCACTTGTTATCCCTATAAAGATGACACTGTGTCCCAGAAAAGCCTCTAGCACAGAAATTCCTGAGGAACATGTTGGATCTACAGACTATTTGGTTCAAGATGGCAAAGACAACGTAGAGCCATTGCTATCATCTTCATCAGCTAGTGGTCTTGGAAGTTTTAATGATGTGGTGGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGAGCAGTGAGGAAGAAGAGAAGGCCCAAAAGAGGGGAAGATTTTAAGTTTACTGAGGCTCTAGTTAAGGCAGATTACTGGTTACTATTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTACTTAATAATTTGGCTCAAATAGGCATTGCACAAGGTATGGAAGATACCACAATCTTGCTGTCACTTTTCAGTTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATCTTCTTGTACCTTGTGTTTGCCTATGCTATCAAAGGAACCCTTTATCCTGCAATTGCAGTTCTTGGTATCTGCTACGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAAGACTTCGGTCTATTGAGCAACTTCATGGCTTTGGGGAACCCACTTGGTGCATTTCTTTTCTCTGCTCTTCTAGCAGGACATATATACGACAATGAGGCAGCAAAACAACACGGTGTAGGCCTCATTGCTTCAAGTGTTGCATGCATGGGTCCAAATTGTTTCAAGCTAACTTTTTTTACTCTGGCTGGTGTCTGTATTGCGGGAACCATCTCCAGCATTATCTTGACTATTAGAATTAAGCCCGTGTACCAAATGCTTTATGCTGGGGGTTCTTTTAAGCTACCTCAAACTTCAGGCCACTAA 1716 0.4295 MLRVKGGKRPPWVGLGAAVWVQIASGNGYCFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGALFSFLGFGVLWLAITKTLDSLPFILLWFALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTQIYSVVFHNSSSKFLLFLAIGIPALCFSTMFLVRPCTPASGDDSAEKGHFLFIQGASVAMGLYILATTLLDNFIHIRDSVSYALLAVMILLLLAPLVIPIKMTLCPRKASSTEIPEEHVGSTDYLVQDGKDNVEPLLSSSSASGLGSFNDVVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTILLSLFSFFNFVGRLGGGVVSEYFVRTKTIPRTIWMTCTQIIMIFLYLVFAYAIKGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKDFGLLSNFMALGNPLGAFLFSALLAGHIYDNEAAKQHGVGLIASSVACMGPNCFKLTFFTLAGVCIAGTISSIILTIRIKPVYQMLYAGGSFKLPQTSGH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0901 571 Pfam Nodulin-like 11 258 IPR010658 -
Gso17g0901 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Gso17g0901 571 CDD MFS_Mch1p_like 10 540 - -
Gso17g0901 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 569 - -
Gso17g0901 571 SUPERFAMILY MFS general substrate transporter 217 552 IPR036259 -
Gso17g0901 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 569 - -
Gso17g0901 571 Gene3D MFS general substrate transporter like domains 348 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0901 Gso-Chr17 8413978 8417391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0901 2 571 Nodulin-like Gene Family AT1G80530 56.294 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0901 - - gmx:100787328 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0901 17 8413978 8417391 Gso17g0901 17 8413978 8417391 ECH
Gso17g0901 17 8413978 8417391 Gso15g1634 15 23976700 23980622 PCT
Gso17g0901 17 8413978 8417391 Gso9g0770 9 12326924 12331352 PCT
Gso15g1634 15 23976700 23980622 Gso17g0901 17 8413978 8417391 PCT
Gso9g0770 9 12326924 12331352 Gso17g0901 17 8413978 8417391 PCT