Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0890 ATGTGTGTGCAAGATGGTGAACAAGCTGGTGAAGATCATATAGAGAAGAACGTTGATAACAGCATAAGAGTTTCATGGCCTTTGCATTGTGATCTCTTGAATGCCCACATGGATAACAAGGAAAAAGACTCTTCTTTTAGAACTCCCTCTGACCAGATCAGTGTTGCAAATTCATCTCCTGTATTTGACGGACATGGAGGGAAGAGCGCTGCACAATTCGTTCGTGATCATCTGCCACGGGTGATTGTTGAGGATGCTGACTTTCCTTTGGAATTAGAGAAGGTTGTCACAAGGTCATTTTTGGAGATCGATGCAGAGTTTGCAAGATCATGTTCTACTGAGTCTTCCCTGTCTTCTGGTACAACTGCACTGACTGCAATTATATTAGGAAGGTCTTTACTTGTTGCCAATGCTGGAGACTGCCGTGCTGTATTGTCCCGTGGTGGAGGGGCTATAGAAATGTCCAAAGATCACAGGCCATTGTGCATTAAGGAAAGGAAGAGGATTGAGTCTCTAGGTGGATACATAGATGATGGTTACCTGAACGGCCAGTTAGGTGTGACTCGTGCACTAGGCAACTGGCATCTCCAAGGAATGAAGGAAATTAATGGAAAGGGTGGACCATTGAGTGCTGAGCCTGAACTTAAATTAATCACATTGACAAAAGAAGATGAATTCTTGATAATTGGGAGTGATGGGATCTGGGATGTTTTTCGCAGCCAAAATGCCGTAGACTTTGCTCGAAGGAGGCTTCAAGAGCACAATGATGTGAAGCAGTGTTGCAAGGAGGTGATAGGAGAAGCAATAAAGAGAGGAGCAACAGACAACTTGACAGTGGTGATGATATGTTTTCACTCAGAACCACCAGCTCCTATGGTTGTAGAAAGGCCTAGAGTCAGAAGAAGCATATCTGCTGAGGGGCTTCAAAATCTTAAGTGCTTGCTAGAAGGATAA 954 0.4403 MCVQDGEQAGEDHIEKNVDNSIRVSWPLHCDLLNAHMDNKEKDSSFRTPSDQISVANSSPVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLEIDAEFARSCSTESSLSSGTTALTAIILGRSLLVANAGDCRAVLSRGGGAIEMSKDHRPLCIKERKRIESLGGYIDDGYLNGQLGVTRALGNWHLQGMKEINGKGGPLSAEPELKLITLTKEDEFLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEVIGEAIKRGATDNLTVVMICFHSEPPAPMVVERPRVRRSISAEGLQNLKCLLEG* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0890 317 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 61 305 - -
Gso17g0890 317 Gene3D - 37 288 IPR036457 -
Gso17g0890 317 PANTHER PROTEIN PHOSPHATASE 2C 61 305 IPR015655 GO:0004722|GO:0006470
Gso17g0890 317 ProSiteProfiles PPM-type phosphatase domain profile. 45 284 IPR001932 -
Gso17g0890 317 Pfam Protein phosphatase 2C 58 276 IPR001932 -
Gso17g0890 317 SMART PP2C_4 37 282 IPR001932 -
Gso17g0890 317 SUPERFAMILY PP2C-like 61 286 IPR036457 -
Gso17g0890 317 CDD PP2Cc 61 284 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0890 Gso-Chr17 8310139 8313456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0890 61 317 PP2C-type Phosphatase Gene Family AT2G25620 61.390 8.11e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0890 K14803 - gmx:100820303 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0890 17 8310139 8313456 Gso17g0890 17 8310139 8313456 ECH
Gso17g0890 17 8310139 8313456 Gso15g1663 15 25354393 25358109 PCT
Gso15g1663 15 25354393 25358109 Gso17g0890 17 8310139 8313456 PCT