Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0864 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGCTGCTTCTCACCGGATGTCTTGGAAGAAGATGAATACCGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCCGAGAAGGGGAGAGACGCAGCCAAATTTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGACAATATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGATCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCTTTTATCTCCTTTGAATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTATATTTGGATTGCCTGATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCCGGCCTGTTGTGCGTGTTTATGGTCAGGACCCTTCAATCCCTGCCAATAGAAGTTCAAAGCTACTTTTTTCAACTTCAATATCCAAAAAGCATGTTCGCCACTACGTACAGGCAGAGTGTATGCTCGTCAAAATTGACATCCGTTGTCGTGTTCAAGGGGATGTGGTTCTCGAGTGCATACATTTAAATGAAGATTTTGTTCGTGAGGATATGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGAACTAACCACAGTCATGGTGAGTGAAGATGCAAATGAGACTGAGAGTGCTGAGACAGAAAGTGCTTCACCAGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGACAGAATATGATTCTCAAGCTTTTCATGAAAATGCAGTGGATGTTGAAACTCATAAAGAGGTCTGGAGGCAAGAGTCAGATCCTCATACTTTTGAGGATTGTACACCCGATGACAGGATTCCCAAGCAGGTTGACAAGATGAATTCTGGTATTAATGCAGTGAAAGATATCTCCATTGATGATGTGCACTATAAATTTGGTGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATGAAGTCAACTTCCACTACATTTGTTTCTGATATGGTGAAACCTCCTCTGGAAACAAAGGAAGTCACCATGGATGTGCACCCAGAATTAGCAGTTATGCAAAATGAATATGATGAAGATAAGGAATTAGACTCCAAGGCAGGGCACCATATGTCTGATTTGTCGGAACAAAAATCTGGTAAACTACTTCCATCTACTGCGAAGAAACAACCTACATCTAACTCAAAGCCAGTCGGAGATACAATTGCAGCAAAGCCAAAGATTAAACAGCAAGATGCCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTCTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCAGTTGTTTCTATTGACAAGATAAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAGATCTTCTGGCTATATAGCAGCAGAAGTAGATGAAAAATGTCCACCATCACCATTGCTGCCAATTAAAGAGACATCTTTTCAGTCAGATACTCAAGCCCAACAACAAAGTTCAGAGCAAGTGCTACAGCCTCCCCCACCACCTCCCCCTCCACCTCCCCTTCCATATCAAAGTAGAATCTCTTCACATGTTTTTGAATCCGTATCATTAAAGGATGATGTATCAGCTCAAGACTCTCCATCTCTGCTAGTATCACCATCTTCTTTGGGTGGAAAGGGGTCCACCATGGCGCCACCACCACCTCCGCCACCACCACCACCACCACCACCACCTTCAACTTTAATGCCATTTACGAAACAATCTGCAACTTCTCTTCCTTCCCCTCCACTCCCACCCCCACCCCCGCCCCCACCTCCACCCTCATTTTTTGGGCTAAATAAAAGGAGCTTAGTTCCTTCCCCATCCCCTCCAGATCATAGTCTTTCTGTAGTGGATACTGTAGCGGCACCTTCACAGCCTCCTCCACCACCACCTCCAATGCCTCCTCCAAGGTATGAAGTTTCATCCATTCTTCCTCTAACACCATTAGCATCACTTCTTCCAAAGCATGGAATTCCATCAATTCCTCCTCCTCCTCCTCCTATTACCATGTTTCCTACAGCTTCAACAGATAGAACTCCACCCCCTCCTCCCCCACCACCTCCGTTTGCATCACATAAAGCTTCACCTCCACCAGCACCCCCACCTCCATCTCCATCTCTGCCTCCCCTTCTACCACCCTTAGCTAATTCATATATATATTTAGCTCCACCACCTGTACCTCCACCGCCACCTCTCCCTCCTTTTGGTAAAGCTTCACTACCTCCATCTCCACCACCTCCACCTCCACCTCCTTTTAGGCAAGCTCCACCACCACCGCCTCCTACATTACATAGAGCTCCACCTACACCTCCCCCTCCACCACCTCCTCCATTGTCTAGAGCCCCCCCTCCCCCACCGCCACCTCTTCCTCCATCAAGTGGAGCCCCACCTCCACCTCCACCACCCCTTCGTCCATCAAGTGGAGCTCCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCACCTCCTAGTGGGAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGCCCCACTTCTCCCACCTCCACCACCACCACCTCCTGGTGGGAGAGGACCACCTCCTCCACCCCCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCGGGTGGTCAAGGACCACCTCCTCCTGGTGGTCGAGGTCCTCCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCTCCTCCACCTCCTCCCGTTGGTCGAGGTCCTCCTCCTCCACCTCCCCCTGGTGTTCCTGGTGCTCCTAGCCCTCCTGGGGGTGGACCCCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCCAATGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGCCCTGCAGGAGGTGGTGCAATGGCACCCCGACGATCCTCCTTAAAGCCGTTGCATTGGAGCAAGGTTACGAGGGCATTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTACCGATTCTGGCAAATCTGGAGGGCGGCGCAAGTCTGTTGGAGCTAAAACTGACAGAATCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCAGTATTGGATGTTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTTTGAAGGGATACACTGGTGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTCTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCATTCAAGATTCAGTTTGGTTCTCAGGTAACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGGAATTCTGTTAAACTAAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACGGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAATCGCCCAGGCTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGCTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCCGAAGTTTTCCATAAGACATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAGCGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCTATGGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATATCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCAAAGGGCATTAACTTGACAAAGAAGGGGGCAAAAGATAGTTGA 4728 0.464 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGDQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSIPANRSSKLLFSTSISKKHVRHYVQAECMLVKIDIRCRVQGDVVLECIHLNEDFVREDMMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPELTTVMVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKTEYDSQAFHENAVDVETHKEVWRQESDPHTFEDCTPDDRIPKQVDKMNSGINAVKDISIDDVHYKFGGSMDSDPHAVKDIAVDDGEMKSTSTTFVSDMVKPPLETKEVTMDVHPELAVMQNEYDEDKELDSKAGHHMSDLSEQKSGKLLPSTAKKQPTSNSKPVGDTIAAKPKIKQQDAHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNFSSSKEKMEDAKTRSLSAPVVSAVVSIDKINDLKSRKVATSRSSGYIAAEVDEKCPPSPLLPIKETSFQSDTQAQQQSSEQVLQPPPPPPPPPPLPYQSRISSHVFESVSLKDDVSAQDSPSLLVSPSSLGGKGSTMAPPPPPPPPPPPPPPSTLMPFTKQSATSLPSPPLPPPPPPPPPPSFFGLNKRSLVPSPSPPDHSLSVVDTVAAPSQPPPPPPPMPPPRYEVSSILPLTPLASLLPKHGIPSIPPPPPPITMFPTASTDRTPPPPPPPPPFASHKASPPPAPPPPSPSLPPLLPPLANSYIYLAPPPVPPPPPLPPFGKASLPPSPPPPPPPPFRQAPPPPPPTLHRAPPTPPPPPPPPLSRAPPPPPPPLPPSSGAPPPPPPPLRPSSGAPPPPPPPMYGAPPPPPPPPSGRGPPPPPPPGGRAPLLPPPPPPPPGGRGPPPPPPPMYGAPPPPPPPGGQGPPPPGGRGPPPPPPPGGRGPPPPPPPVGRGPPPPPPPGVPGAPSPPGGGPPPPPPLGAKGANVGADPRGRGRGYARPAGGGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSGKSGGRRKSVGAKTDRITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPRLLDFHLDLVSLEASTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKTLKEFIAVSESEVASLTNLYSVVGRSADALALYFGEDPARCPMEQVTTTLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS* 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0864 1575 MobiDBLite consensus disorder prediction 726 746 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 651 1169 - -
Gso17g0864 1575 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1161 1561 IPR015425 -
Gso17g0864 1575 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Gso17g0864 1575 SMART PTEN_C2_2 198 338 IPR014020 -
Gso17g0864 1575 Gene3D - 202 341 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 676 694 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 532 553 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 525 554 - -
Gso17g0864 1575 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 749 769 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 779 797 - -
Gso17g0864 1575 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 695 711 - -
Gso17g0864 1575 SMART it6_source 695 1575 IPR015425 -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 858 1139 - -
Gso17g0864 1575 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1113 1555 - -
Gso17g0864 1575 Gene3D Protein tyrosine phosphatase superfamily 14 201 IPR029021 -
Gso17g0864 1575 Pfam Formin Homology 2 Domain 1167 1535 IPR015425 -
Gso17g0864 1575 Gene3D Formin, FH2 domain 1180 1573 IPR042201 -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 823 842 - -
Gso17g0864 1575 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gso17g0864 1575 PANTHER FORMIN-J 1083 1568 - -
Gso17g0864 1575 PANTHER FORMIN-J 1 928 - -
Gso17g0864 1575 MobiDBLite consensus disorder prediction 1549 1575 - -
Gso17g0864 1575 Coils Coil 1442 1462 - -
Gso17g0864 1575 Coils Coil 1536 1565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0864 Gso-Chr17 8065299 8077929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0864 1 635 FH2 protein (formin) Gene Family AT5G07740 61.077 0.0 790