Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0862 ATGGAAGTAGAAAACAAAGTCATCATAGTGAAGCTTTCTAATTTTGTGTCATCCCTTTCATTAATTCTTCACCTTTTCCTTTTCACCCTCGCTAAATGTGACTCTTCTTTCTCACCAAATGTTAACTATCTCATTGATTGTGGCTCCTCCCACCCCACTCAGCTCAAAGATGGTAGAATCTTCAAATCTGATCGTGAAACTACTTCTCTCCTATCCACAACTGAAGATTTGCACATATCAGTTAACTCAAATCTCTCCCCTTCTATTCCTTCTTTATCACTTCCTTTGTATCAAACCGCAAGAGTTTTTCAAGAAGAATCCACCTACTCCTTTTACATCTCCAAAAGTGGTAGACTTTGGATTCGTCTCTACTTCTTCCCTCTCCCTGACCCTTCCTTTAACCTAACAAGTGCTGTTTTCTCTGTCCAAACCAATCATCATGTGCTCTTGCATGAGTTCTCAGCATGGAACAATGACTCACCCGTTTTCAAGGAATACCTTGTTAATGTTTCTGATAGTATTTTCTCGCTTGAATTCAAGCCTAAGAAAAACTCATTTGCGTTCATCAATGCCATTGAGGTTGTCTCAGCCCCTGACACTCTTATCTCAGATTCAGCAACTGCACTTTCCCCACTTGGAGAATTCAAAGGCTTGTTGAATTCTGCTCTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCAGTCATAACTCCTGACAATGACACTTTGTCTAGAACATGGGAAACTGATGGATCTTACAACATTTTCCCACAGGGTTCTGTGAATGTTTCTGTCTCCAACAAAAGCATAAAGTATCCTCGTACGGGTATACTTACACCTTTGATTGCTCCAAACTCAGTTTATGCAAGTGCTGTACACATGAAAGACGCTAGAGTTATGGAACCAAATTTCAATCTAAGTTGGGTTGTGAACGTGGAAAGTGGCTACTCTTATTTGATAAGAATTCATTTCTGTGACATTGTGAGCAAGAGTCTTAACCGGTTATACTTCAATGTGTACATCAACGGGATTGAGGGTGTGTCAAGTTTGGATCTTTCATTGCAAACCAAAGCTCTAGCCACTGCTTTTTACAAGGACTTTGTGCTAAATGCATTTTCCATCACAAGCGGTTCCATTTTGGTTCAGGTGGGACCAGCCAATCTACAACATGGCATGACCGATGCAATTGCGAATGGAATTGAGGTGATGAAGATGAGCAACAACGCAGACAGCTTGGATGGTTTTTTCTCTGTTGATGGCAAATACAAAGGGCCAAGTTCACCAACCAAGGCAATCAAAATCTTTGCATGCGTTGGAATAGCTTTGGCTGTGACAACAATGTTGTTGCTAGCAATGATTTGTATAAGGTGGAAAAAGAGGCCTCAAGATTGGGAAACGCATAACAGGTTCTCATCATGGCTCCTCCCTTTCCATTCAGCTAGAATGGTTTCAAGCAAAAGCAGTTTTCGAAGCTCAAATGCATTCAGTTCCCACAAGAGCAATAAGCATGGCCATGGTGTTTCCCAAAAAGGGCGTGAAAGGTTCTTCCCCTTCAGTGAAATGCTCCAAGCCACCAATAATTTCGATGAGAAGAAAGTGATAGGCATTGGAGGATTCGGGAAAGTGTATCTTGGAACGTTGGAAGATGGGACAAAGGTTGCTATAAAACGAGGAAGTGGTAGCTCAGAACAAGGCATCAATGAGTTCAGAACAGAACTAGAAATGCTCTCAAAGCTTCGCCATCGCCACCTAGTCTCTTTGATGGGTTTCTGTGATGAAAATTCAGAGATGGTTCTTGTGTATGAGTACATGGCTAATGGCCCCTTTCGTTCTCACCTCTATGGCTCCAACCTCCCTCTTTTGTCATGGGAAAAGAGGCTTGAAATATGCATTGGTGCTGCTCGTGGCTTGCACTATCTCCACACTGGTGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAACTATGTTGCCAAGGTTTCTGACTTCGGTTTGTCAAAAGCTGTCCCAGAGAAGGCTCAAGTTAGCACAGCTGTGAAGGGTAGTTTGGGGTACCTTGACCCTGAGTATTATAGGACCCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTAATTGAGGTACTTTGTGCTAGGCCAGTTATTTGCCCTACACTTCCAAGAGAGGAGATTAACTTGGCTGATTGGGCAATGGCACAACATAGAAGACGAGTGCTTAATGAAGTAATTGATCCTCGTATTATCAAGAGTATTAGTCCTCAATCCTTAAATGTTTTTGTGCAAATTGCTGAGAGATGTTTATCTGATTCTGGTGTTGATAGGCCTAGTGTGGGGGATGTGTTGTGGCATTTGGAATATGCTTTGCGCCTACAAGATGATGCCACAAGGATTAAAGAACTTGATGAAAAAATTGAAAGTATAGTCACAAATGAATGTAATGATAATGATAATGTAGCAGGTCACTCGGGTGATCCAGCAAGTGATGTGTCTAATAGCACAGATGCTAATTCTGCTTTGTTTTCTCAGATAGCCAACTTTCAAGGAAGGTAA 2586 0.4169 MEVENKVIIVKLSNFVSSLSLILHLFLFTLAKCDSSFSPNVNYLIDCGSSHPTQLKDGRIFKSDRETTSLLSTTEDLHISVNSNLSPSIPSLSLPLYQTARVFQEESTYSFYISKSGRLWIRLYFFPLPDPSFNLTSAVFSVQTNHHVLLHEFSAWNNDSPVFKEYLVNVSDSIFSLEFKPKKNSFAFINAIEVVSAPDTLISDSATALSPLGEFKGLLNSALEVSYRINVGGPVITPDNDTLSRTWETDGSYNIFPQGSVNVSVSNKSIKYPRTGILTPLIAPNSVYASAVHMKDARVMEPNFNLSWVVNVESGYSYLIRIHFCDIVSKSLNRLYFNVYINGIEGVSSLDLSLQTKALATAFYKDFVLNAFSITSGSILVQVGPANLQHGMTDAIANGIEVMKMSNNADSLDGFFSVDGKYKGPSSPTKAIKIFACVGIALAVTTMLLLAMICIRWKKRPQDWETHNRFSSWLLPFHSARMVSSKSSFRSSNAFSSHKSNKHGHGVSQKGRERFFPFSEMLQATNNFDEKKVIGIGGFGKVYLGTLEDGTKVAIKRGSGSSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGSNLPLLSWEKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKAVPEKAQVSTAVKGSLGYLDPEYYRTQQLTQKSDIYSFGVVLIEVLCARPVICPTLPREEINLADWAMAQHRRRVLNEVIDPRIIKSISPQSLNVFVQIAERCLSDSGVDRPSVGDVLWHLEYALRLQDDATRIKELDEKIESIVTNECNDNDNVAGHSGDPASDVSNSTDANSALFSQIANFQGR* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0862 861 MobiDBLite consensus disorder prediction 824 845 - -
Gso17g0862 861 Gene3D Phosphorylase Kinase; domain 1 487 603 - -
Gso17g0862 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Gso17g0862 861 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Gso17g0862 861 SUPERFAMILY Protein kinase-like (PK-like) 510 798 IPR011009 -
Gso17g0862 861 SMART serkin_6 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0862 861 CDD STKc_IRAK 534 797 - -
Gso17g0862 861 PANTHER OS07G0166700 PROTEIN 23 857 IPR045272 GO:0004714|GO:0006468
Gso17g0862 861 Pfam Protein tyrosine and serine/threonine kinase 531 736 IPR001245 GO:0004672|GO:0006468
Gso17g0862 861 Gene3D Transferase(Phosphotransferase) domain 1 604 825 - -
Gso17g0862 861 ProSiteProfiles Protein kinase domain profile. 528 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0862 861 Pfam Malectin-like domain 45 405 IPR024788 -
Gso17g0862 861 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 857 - -
Gso17g0862 861 Gene3D - 222 407 - -
Gso17g0862 861 Gene3D - 38 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0862 Gso-Chr17 8054869 8057729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0862 30 815 Receptor kinase-like Gene Family AT5G61350 59.051 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso17g0862 Malectin_like 2.1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0862 - - gmx:100814982 1632.46