Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g0854 | ATGGAAACTGGAATAATCCAGGGACCTTGGGGATTTCGCTCTCTATCCAAATTCGTTTTATGCACCATTTCTGGGGCCCTTACCGTGTGTTTTGCCCTTGCTGGGGCCCTGACAGGAGCTATAGCTGGTGCTCTAGCAGCTAAGGCCACTAAGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGCTCTATACTCTCTGTGGAGGTGTTGGAAGCTTCCCGTGCCTATTGGTGTATGGAGCAAACTGGCTCACGGAGTGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGTGGGAGGCTTGTTGAGGAATCCCTTACACCTGCTATTTTAACTGCTTACAATTTGCAGGTTGGCATTGCGAATACAGGCTATGTTGAGACTCATGATGTTCATGGCTTAGTTGCACCCAGAGGACTGTCAGGAGATTCATTGAAGAGGTTACCCCACCATATGATCTCAAAGGCAGAGAATACCTGCTGTGCAATATGTTTGCAGGATATTGAAGTAGGGGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCTTGTCCTGTCTGCAGACAGAATGTATAA | 633 | 0.4692 | METGIIQGPWGFRSLSKFVLCTISGALTVCFALAGALTGAIAGALAAKATKSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRSASSMADFIEELVRGRLVEESLTPAILTAYNLQVGIANTGYVETHDVHGLVAPRGLSGDSLKRLPHHMISKAENTCCAICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g0854 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 210 | IPR013083 | - | |
Gso17g0854 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 165 | 207 | IPR001841 | - | |
Gso17g0854 | 210 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 11 | 209 | IPR044523 | - | |
Gso17g0854 | 210 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 11 | 209 | - | - | |
Gso17g0854 | 210 | SUPERFAMILY | RING/U-box | 159 | 210 | - | - | |
Gso17g0854 | 210 | Pfam | Ring finger domain | 165 | 207 | IPR001841 | - | |
Gso17g0854 | 210 | SMART | ring_2 | 165 | 206 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g0854 | Gso-Chr17 | 8014982 | 8018808 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g0854 | 14 | 210 | C3H Transcription Factor Family | AT1G74410 | 55.721 | 1.15e-74 | 223 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g0854 | - | - | gmx:100306666 | 392.889 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0210 | 5 | 2192432 | 2195897 | Gso17g0854 | 17 | 8014982 | 8018808 | GST |