Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0823 ATGGAGATTGCTTCGGAGAGATCTGGTGATGGATCTAGCGGACTCAAGGAAGAAAATAGTGTTGGTGATGATGATGGTCGTCATAAACAAGAGATTATTGTCGAGGAACCACTCGTGGCTAATACCGAAAGATCCATACTAGAGGCTGGACCTAGCACATCCCCAAACAAAAAGGAAGACGAGGTTGATGATCAGCTTGAGACTGCTAAAGCTGAAATGGGTGTGGTGAGAGAAGAAAATCAACGGCTAAAGATGTGTTTGAACAAAATAATGAATGAATATCGGACACTAGAGATGCAATTTCAAGATATACTAAAGCAACAAGGGACAAAAAAGAACGTTGATAAAGGAAAGGCTGATAGCCATGAAGAAATATTAGAGGAATCGGATCTTGTTTCCCTCTGCCTTGGAAGAGTTCCTACCATTAATGCAAGAAGTGATGAGAAAATCAAAGTTTCTAATAAGCCATTGAAGGATGATGAAGGGTTTAATAACGAAGAGTTGACTCTTGGACTAGAGTGCAAATTTGAAACATCAAAGTCAGGAAGCACGACTGAAGCTTTGCCTAATAATATTCCAAGCCCAGAAAATAGTTGTGAAGTACCAAAGGAAGAAGGTGGGGAGAGTAAGGAGGCACTCAAGACTATGAGAGACAGTACAGAGGATGAAGTTGCTCAGCAAAATCCTACAAAGAAACCTCGAGTTTGTGTTAGAGCAAGATGTGACACTCCAACAATGAATGACGGATGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGGAATCCTTGCCCTCGAGCTTACTATCGTTGCACAATTGCACCGTCATGCCCAGTTAGAAAACAGGTGCAAAGATGTGCTGATGACAAGTCGATTTTAATCACCACCTACGAAGGGACCCACAACCACTCTCTTCCACCAACAGCCACTGCCATGGCATCCACAACTTCCGCAGCTGCCTCCATGCTCTTGTCTGGTTCATCAACCTCTAACTCTAACTCCGCCTCAATACCTTCAGCAACCCCCACAAATCTCCACGGCCTCAACTTCTATCTCTCTGAAGGTTCAAAGCCAAGACAACTATACCTATCCAACCCTGCACTATCGTCTTCACCTTCACATCCAACCATAACTCTAGACCTCACTACTTCACACCCTGCAGCATCTTCCTCCTCATCATCACCCTTTTTCAGATTCAATTCAAACTACAACAACAACAACCAACCCAGATACCCTTCTTCCTCATCAAGCCTAAGCTTCAGTAGTAATAATTCCTCCCAAATTGCCAATGCTATATCTTGGAGCAACGGCTTCTTAAACCACAATAATAGGGACATCCTTAGTAGTGTGAACTTTGGAAGACAACAACAAATGGAGAACGTGTACCAATCCTACATGCAAAAGAACAACAGCAACAACAACAACAACAACACAAGCCTTGTTCCTCAAGCTGATACTATCTCTGCAGCAACGAAAGTGATCACAGCGGACCCCACTTTTCAGTCAGCTTTGGCAGCAGCACTTTCTTCGTTTATTGGTGGCGGTGGTGTTGGAAACACGCGAGGAAGTCAAGGTTGTAATTTCGGAGAAAGTTTGAGTTTGGGTCAGAAAATGAAATGGGGTGAGGTGTTTCCAGTGTCGGAGAAAGGTTGTGCATCGAGCTTCGTGAACAAAACGCCGGTAGCGAATACACAGACGGAAAGTTTGATGTTTCTGCCGCCGTCGTCTTTGCCGTTTTCTTCTACCACCAAAAGTGCATCTGCATCTCCTGCTGATAATAGCAACACCACCATCAATTGA 1803 0.4376 MEIASERSGDGSSGLKEENSVGDDDGRHKQEIIVEEPLVANTERSILEAGPSTSPNKKEDEVDDQLETAKAEMGVVREENQRLKMCLNKIMNEYRTLEMQFQDILKQQGTKKNVDKGKADSHEEILEESDLVSLCLGRVPTINARSDEKIKVSNKPLKDDEGFNNEELTLGLECKFETSKSGSTTEALPNNIPSPENSCEVPKEEGGESKEALKTMRDSTEDEVAQQNPTKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTIAPSCPVRKQVQRCADDKSILITTYEGTHNHSLPPTATAMASTTSAAASMLLSGSSTSNSNSASIPSATPTNLHGLNFYLSEGSKPRQLYLSNPALSSSPSHPTITLDLTTSHPAASSSSSSPFFRFNSNYNNNNQPRYPSSSSSLSFSSNNSSQIANAISWSNGFLNHNNRDILSSVNFGRQQQMENVYQSYMQKNNSNNNNNNTSLVPQADTISAATKVITADPTFQSALAAALSSFIGGGGVGNTRGSQGCNFGESLSLGQKMKWGEVFPVSEKGCASSFVNKTPVANTQTESLMFLPPSSLPFSSTTKSASASPADNSNTTIN* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0823 600 MobiDBLite consensus disorder prediction 11 34 - -
Gso17g0823 600 MobiDBLite consensus disorder prediction 1 67 - -
Gso17g0823 600 MobiDBLite consensus disorder prediction 181 197 - -
Gso17g0823 600 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g0823 600 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g0823 600 MobiDBLite consensus disorder prediction 181 216 - -
Gso17g0823 600 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g0823 600 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g0823 600 MobiDBLite consensus disorder prediction 201 216 - -
Gso17g0823 600 Coils Coil 87 107 - -
Gso17g0823 600 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 595 IPR044810 GO:0003700
Gso17g0823 600 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g0823 600 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 48 595 - -
Gso17g0823 600 MobiDBLite consensus disorder prediction 364 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0823 Gso-Chr17 7724460 7729340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0823 40 515 WRKY Transcription Factor Family AT1G18860 40.000 2.65e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g0823 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0823 - - gmx:100805360 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0239 5 2484078 2490451 Gso17g0823 17 7724460 7729340 GST
Gso1g0372 1 4711945 4718189 Gso17g0823 17 7724460 7729340 PCT