Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0822 ATGTTCAAGCTTTTGGTTAGTAGAGCAGCTAGGGTTTCAACTCCACACAACCACAATGCCTTTGCTTCTTTCGCTTTCTCTAGGTATGCTCATTCATTACCATTTGCAACTGTAGAAGCAGAAGAGATATCAGGCTCTAGGGCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAGTTGTAGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGGCATTCAGCCCTTTGTAGAAAGCTTGTCCAGCTGTCCCAAACATGGTGCACACAATCCTTTTAAGGCACCAGAGAGATATCTCATGTTTGGAGAGATATCTGCTAAGGCAGCTCACATGTTATCACTTCCTAAGGTTTTGGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGGTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTCTAGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTGTTGCTGGAGGGAAATCCACGAATGACTCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTGCATCAGGAAGATTACGTAGCATGGGTCTGTGATCAGGATGCATACGCATGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGTTGGCAGACTTGACAATCGGCCCAGTTCTCACAGTTACGACTGATTCAATGCTTGAGCATGTGAATAAGTTGCTTGAGATACCAGGATCAAAGTTGCTATTCGGGGGTAGTCCTCTAGAGAACCATTCAATTCCACCTATTTATGGTGCTATTAAACCAACAGCTGTCTATGTTCCTCTCGAAGAAATTATGAAGGATAAGAATTTTGAGCTTGTAACAAAAGAAATATTTGGACCATTTCAGGTTATCACGGACTATCAAAACAGTCAGCTAGCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAATGATCCTTTGTTTTTACAGGAAGTCATTGGCAAATCAGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACGACCGGAGCTCCACAGAATCACTGGTTTGGACCCGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATCTATGATTTTGGGCCTGTGCCAAAGAATTGGGAAGTTCCTCCTTCTACTTGA 1662 0.4152 MFKLLVSRAARVSTPHNHNAFASFAFSRYAHSLPFATVEAEEISGSRAAEVLNLVQGKWVGSSNWNTVVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGAHNPFKAPERYLMFGEISAKAAHMLSLPKVLDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPLEDVDFINSDGKTMNKLLLEGNPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLADLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGSPLENHSIPPIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYQNSQLAVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKNWEVPPST* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0822 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Gso17g0822 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Gso17g0822 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 494 IPR016163 GO:0016620
Gso17g0822 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 303 IPR016162 GO:0016491
Gso17g0822 553 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 24 552 - -
Gso17g0822 553 Pfam Aldehyde dehydrogenase family 66 495 IPR015590 GO:0016491
Gso17g0822 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 24 552 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0822 Gso-Chr17 7709646 7717948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0822 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 78.957 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0822 K00294 - gmx:100806579 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0241 5 2507772 2515088 Gso17g0822 17 7709646 7717948 GST