Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0806 ATGGGGAACTGCAACGCGTGCGTGAGAGTTGATGACGTGGCGGACTCAAACCGCGGCAAAAACAAGAATAATAAGAAAACCAAACCGAACCCGTACGCGGAGGAGGAGATACGCTCCGGCGTTCCAATCCGCGTCCTGAAGGACGTAACGTCACGGAGCCTCATCGGCGACAAGTACGTGATAGGCCGGGAGCTAGGTCGCGGTGAGTTCGGGATAACGTACCTCTGCACGGACCGCGAGACGAAGCAGGAACTCGCGTGCAAGTCGATCTCGAAGCGGAAGCTGAGGACCGCGATCGACGTGGAGGACGTGCGGCGCGAGGTGGCGATCATGTCCACCTTACCGGAGCACGCTAACGTGGTGAAGCTGAAGGCGACTTACGAGGACGAAGAGAACGTTCATCTCGTTATGGAGCTTTGCGCCGGCGGAGAACTCTTTGATCGGATCGTCGCGCGGGGGCACTACAGCGAGCGTGCGGCGGCGTACGTGGCGAGGACTATTGCTGAGGTTGTTAGAATGTGTCACGCCAATGGAGTTATGCATCGTGACCTTAAGCCAGAGAATTTTCTGTTTGCGAATAAGAAGGAGAATTCTGTTCTCAAGGCTATTGACTTTGGACTCTCCGTGTTTTTCAAGCCAGGGGAGAGATTTTCGGAGATTGTGGGGAGTCCTTATTACATGGCGCCGGAGGTATTGAAGAGGAATTATGGGCCAGAGGTGGATGTGTGGAGTGCTGGGGTGATTCTTTATATTTTGTTGTGTGGTGTTCCTCCGTTTTGGTCAGAGGACGAACGAGGGGTGGCTTTGGCGATATTGAGGGGAGTGATCGACTTCAAGAGAGAACCGTGGCCTCAGATTTCGGATAGTGCTAAGAGTCTTGTGCGCCAGATGTTGGAGCCTGATCCTAAGAAGCGCTTGACGGCTGAACAGGTGCTTGAGCATTCCTGGTTACAAAATGCAAAGAAAGCTTCAAATGTTCCATTAGGAGATATTGTGAGGACAAGGCTTAAGCAATTCTCTGTGATGAATAGATTTAAAAAGAGAGCGCTTCGGGTAATTGCAGAGCATTTGTCTGTTGAAGAGGTAGAAATAATCAAAGACATGTTTACATTAATGGACACCGACAAAGATGGCAAAGTAACATATGAGGAACTGAAGGTTGGGTTACGGAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTTGACTATGGAGAGTTTGTAGCCGTGACAATTCACTTGCAAAGAATGGAGAATGATGAGCATTTCCGCAAAGCATTCATGTATTTTGACAAAGATGGGAGTGGGTATATCGAGTTAGGGGAGCTAGAGAAAGCATTAACAGATGAGTCGGGAGATACTGATACTGCTGTATTGAATGACATCATGCGTGAAGTCGACACTGACAAGGATGGTCGCATCAGTTATGAAGAGTTTGTGGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCAAGGCAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTGATGAAGGATGGCTCACTTCAGCTTCATGACGATATTAGTGGTCAAGCTGAAGTGGTTTGA 1626 0.4883 MGNCNACVRVDDVADSNRGKNKNNKKTKPNPYAEEEIRSGVPIRVLKDVTSRSLIGDKYVIGRELGRGEFGITYLCTDRETKQELACKSISKRKLRTAIDVEDVRREVAIMSTLPEHANVVKLKATYEDEENVHLVMELCAGGELFDRIVARGHYSERAAAYVARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWSEDERGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHSWLQNAKKASNVPLGDIVRTRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGKVTYEELKVGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHFRKAFMYFDKDGSGYIELGELEKALTDESGDTDTAVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDDISGQAEVV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0806 541 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0806 541 Gene3D Transferase(Phosphotransferase) domain 1 145 325 - -
Gso17g0806 541 SUPERFAMILY EF-hand 345 524 IPR011992 -
Gso17g0806 541 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Gso17g0806 541 SMART efh_1 472 500 IPR002048 GO:0005509
Gso17g0806 541 SMART efh_1 364 392 IPR002048 GO:0005509
Gso17g0806 541 SMART efh_1 436 464 IPR002048 GO:0005509
Gso17g0806 541 SMART efh_1 400 428 IPR002048 GO:0005509
Gso17g0806 541 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Gso17g0806 541 Gene3D Phosphorylase Kinase; domain 1 60 144 - -
Gso17g0806 541 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Gso17g0806 541 PANTHER BNAA09G44420D PROTEIN 19 517 - -
Gso17g0806 541 Pfam EF-hand domain pair 435 498 IPR002048 GO:0005509
Gso17g0806 541 Pfam EF-hand domain pair 365 424 IPR002048 GO:0005509
Gso17g0806 541 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Gso17g0806 541 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0806 541 CDD STKc_CAMK 58 316 - -
Gso17g0806 541 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Gso17g0806 541 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0806 541 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Gso17g0806 541 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Gso17g0806 541 CDD EFh 436 498 IPR002048 GO:0005509
Gso17g0806 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Gso17g0806 541 Gene3D - 326 501 - -
Gso17g0806 541 SUPERFAMILY Protein kinase-like (PK-like) 44 344 IPR011009 -
Gso17g0806 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 517 - -
Gso17g0806 541 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Gso17g0806 541 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0806 Gso-Chr17 7538578 7542363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0806 1 541 EF-hand Containing Proteins AT1G74740 78.229 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso17g0806 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0806 K13412 - gmx:100800559 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0257 5 2663879 2667894 Gso17g0806 17 7538578 7542363 GST