Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0803 ATGCCCTACGGATCCCCTCCTTCAGTTCCCGGCGAACGATCCTCGCCGGAACCCAATCCTCCGAACCATGTCTCCGATTTGAAGGAGGAAACCACCGCCGCCGCTCCTCCTCCGCTCACCACCAGGAGCACCCGCCCCTCCCGCGCGTGCACCATGCGCGCCTCCTCTCGCCTCCTTTCCTCGCCGGCGCCGTCGAAGAAGGTGGCGCGTGCGAGGAAGGAGGGTTCGCCGCGGCCACCGTCGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAGCCGCCGTCGCCGTCGCAGTTGCCGCGGTGGAACCTGCGGTCGATGTGGGAGTTCGCTTCCGTGCTGAATTTCTTGCACCTGTTTAGGCCTCTTTTGAATATCTCGTTGGAATTCTCTGCGGAAGAGTTCGAGACAGCTCTTCTTGCTCCCAACGATACTTTGTTTCATATACATATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGCGATACTTGGATAACCGTATTATGCAGGAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAATATATAAATTACTTGATCCAGGGGTCCGTGTTGTTATCTTAAAAGTATTATGTGATATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATGAAACACGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCAAATGGAATTTCTTATTGGTATGAAGATGACCCCATTATTGGTCATAGGATGTATCGAGAAATAAGGAAAACCGAAGTGGTACAAATGAAGAAAGGGAAACCAAGAGGTTCCCTGGTTCTTTCTAACACATCATACCTGTGGGAAGTAATTGCTACCAATTTTGATGAATTTGAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGGAAAAGGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCATAAGAAAAAGGAGAAGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTGCTTGATAATTACTTGGTTGTTGACGGGCTTGGTCCTGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTATGATCAGTCAATCAAGGAAGCAATTAAAGTAACCAAGCAGAAACAGTCATCTCCAGAACATATGCCCAGGAGAGAATCGGTAGCAAAAGCGGAAGCTTTGACTAATGGTAAATATGGTCCTCCATATGCTACACTAGATCGGAATTTTGGTATATCATCTCCAGAATCATCTGATTCTGATGATGACAAAGAAGATAATGAAACTGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAAACGGTATACAGAAAGAGAGTTTGTTGAGGCAGTATCAGATAATGAGACAGACTTCGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAAAAGGATGTCTTCTAGTGGCTCCGAAGGAGATGATGAAGAGTATCAGTGGGATGAATACAATGTTGAAGATGATGAAGAAGAAGATGACGATGACGATGATTCCTTAAGCATAAGTGAGGATAGTGACAAACCCCTCAAGGTCAAACAGTTGCGTGGCCGCACAAGGAGAGAAACCAAACTCAGGTCTGTGGGTGAGATACAATCCGGTCTAAGACGCAGTAAGAGGGCAACTAAAAATCGTATAAATTACCGACAATGTGAGGCATCAGAATCAGAAACAGAGTTGATCAAATCTGAGAAGTCTAATTCATCAGCTGATCACTCAGATCCCAGTGAGAATGGTGAATACATGATGGAAAGTGAAGATTCAGATGGCAGTGATAATGAAGAACAAGAAAAGAAAGTAGATGAGCCTGTTCCATATCCAGCAGTAGAAGAGAATGAACAAAACCAGCCTCCTGAAAAATTAAGCAGTCCTGGTCAGGAGGAAGTTGAGAGCAGCACAGGAAAGAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCACGGGTTTCGATGATGGTCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 2142 0.45 MPYGSPPSVPGERSSPEPNPPNHVSDLKEETTAAAPPPLTTRSTRPSRACTMRASSRLLSSPAPSKKVARARKEGSPRPPSQCSKIVTPLVEPPSPSQLPRWNLRSMWEFASVLNFLHLFRPLLNISLEFSAEEFETALLAPNDTLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEIYKLLDPGVRVVILKVLCDIRVEQEDIRSYIDNSMKHGVQLSTFRKERIGGDSNGISYWYEDDPIIGHRMYREIRKTEVVQMKKGKPRGSLVLSNTSYLWEVIATNFDEFEDVSEKLFSSKNRTETSVGKRLKIDMLPEIEKVHKKKEKLLKKQHRQALLLDNYLVVDGLGPGRSLRDRKPVTYTFDDYDQSIKEAIKVTKQKQSSPEHMPRRESVAKAEALTNGKYGPPYATLDRNFGISSPESSDSDDDKEDNETDNLDRSNRQRRRPKRYTEREFVEAVSDNETDFDSDDDIVGEAVYDEEYLKKRKQKRMSSSGSEGDDEEYQWDEYNVEDDEEEDDDDDDSLSISEDSDKPLKVKQLRGRTRRETKLRSVGEIQSGLRRSKRATKNRINYRQCEASESETELIKSEKSNSSADHSDPSENGEYMMESEDSDGSDNEEQEKKVDEPVPYPAVEENEQNQPPEKLSSPGQEEVESSTGKRRFLDLNELAPSTGFDDGPNTIMKDEDNDY* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0803 713 MobiDBLite consensus disorder prediction 36 62 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 640 654 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 501 521 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 458 484 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 523 550 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 401 417 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 401 713 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 1 96 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 598 619 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 663 677 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 1 17 - -
Gso17g0803 713 MobiDBLite consensus disorder prediction 485 500 - -
Gso17g0803 713 PANTHER REMODELING AND SPACING FACTOR 1 23 712 IPR028938 GO:0006355|GO:0031213
Gso17g0803 713 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 23 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0803 Gso-Chr17 7493131 7501764 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gso17g0803 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0803 - - gmx:121173822 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0261 5 2717826 2726647 Gso17g0803 17 7493131 7501764 GST
Gso17g0803 17 7493131 7501764 Gso4g1475 4 43393442 43403846 PCT
Gso17g0803 17 7493131 7501764 Gso6g1586 6 16477480 16487068 PCT
Gso4g1475 4 43393442 43403846 Gso17g0803 17 7493131 7501764 PCT
Gso6g1586 6 16477480 16487068 Gso17g0803 17 7493131 7501764 PCT