Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0796 ATGGTGTCGACGTTCGAGAAGAAGAAGAACCTGAGCAAGCTCATCATCCCTTCATCTTCTTCTTCCCCAAATCCATCCCCATCAAGCCCACACGTCATTTTCAGTAGGTCCCACTCCTTCGTGGGCCCCTCTCCTCGCTTTGTCCCTTCCTCCACCCCTCTCTTCTTCCTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTACCATTTGGTCCCGACCCCCCAAAAATTGGACCTTCCGATTTCCATATTCTTCGTGTTGTAGGACAGGGTGCCTTTGGGAAGGTCTTTCTCGTCAGAAAAAAAGGTGATTGCTTCGACGACGCTGATGGCGTGTTCGCCATGAAGGTGATGAGGAAAGACACCATCATTAAAAAAAACCACGTCGATTACATGAAAGCCGAGAGGGATATTCTCACCAAAGTCCTTCACCCTTTCATCGTTCAGCTCCGTTACTCTTTCCAGACCAAATCTAAGTTGTATTTGGTGTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCAATTGTATCGTCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCACACCTTCACAAAAACGGCATCGTGCATCGAGATCTTAAGCCCGAAAACATTCTTATGGATGCTGATGGGCATGTCATGCTAACTGATTTTGGACTGTCAAAAGAGATTAATGAATTGGGGAGATCCAACTCTTTTTGTGGGACTGTAGAATACATGGCTCCAGAAATCCTACTGGCTAAAGGCCATAATAAGGATGCAGATTGGTGGAGTGTTGGTATTCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACAATAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTAAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCTTTGCTCAAAGGATTGCTACAAAAGGATCCATCGACAAGGTTAGGCAATGGGCCAAATGGAGATGGCCATATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCGAAGTTCAAACCAGATGTGTCTGCGAAAGATTGTACATCTAATTTTGACCAATGTTGGACAGCAATGCCTGCTGATGACTCGCCAGCACCCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTAGCACCTAACCCTTGGCTTTCATCTAGATCACTAGATTGA 1248 0.4415 MVSTFEKKKNLSKLIIPSSSSSPNPSPSSPHVIFSRSHSFVGPSPRFVPSSTPLFFLEEEEEEEEEEELPFGPDPPKIGPSDFHILRVVGQGAFGKVFLVRKKGDCFDDADGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFQLYRQGIFSEDQARLYTAEIVSAVSHLHKNGIVHRDLKPENILMDADGHVMLTDFGLSKEINELGRSNSFCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHNNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPSTRLGNGPNGDGHIKSHKWFRSINWKKLEARELEPKFKPDVSAKDCTSNFDQCWTAMPADDSPAPTPTAGDHFQGYTYVAPNPWLSSRSLD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0796 415 SMART pkinase_C_6 345 404 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso17g0796 415 MobiDBLite consensus disorder prediction 1 35 - -
Gso17g0796 415 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 18 411 - -
Gso17g0796 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Gso17g0796 415 Gene3D Phosphorylase Kinase; domain 1 81 386 - -
Gso17g0796 415 MobiDBLite consensus disorder prediction 13 35 - -
Gso17g0796 415 Pfam Protein kinase domain 83 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0796 415 ProSitePatterns Protein kinases ATP-binding region signature. 89 117 IPR017441 GO:0005524
Gso17g0796 415 Gene3D Transferase(Phosphotransferase) domain 1 168 363 - -
Gso17g0796 415 ProSiteProfiles Protein kinase domain profile. 83 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0796 415 PANTHER RIBOSOMAL PROTEIN S6 KINASE 18 411 - -
Gso17g0796 415 Pfam Protein kinase C terminal domain 369 402 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gso17g0796 415 SMART serkin_6 83 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0796 415 ProSiteProfiles AGC-kinase C-terminal domain profile. 345 412 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso17g0796 415 SUPERFAMILY Protein kinase-like (PK-like) 81 407 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0796 Gso-Chr17 7422629 7426877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0796 30 405 AGC Kinase Gene Family AT3G08720 61.194 2.42e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Gso17g0796 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0796 K04688 - gmx:100798259 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0268 5 2787296 2790847 Gso17g0796 17 7422629 7426877 GST