Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0790 ATGCACTCCATGTTGGCCAAGAACATACTCAGTGCTGAGACACTTGAAAAACTCGCTAAAATAGCTCCTACCCAAGAAGAAGCCAAAATCATGCAATTCAGTGATAATCCGGATAAACTTGTTGATGCTGAGTCATTCCTCTATCACATCCTGAGAGCAGTTCCAACAGCATTCATTCATTTAAAAGCATTGCTTATAAGATCGAGTTACGGTTGCGAAGTTATTCAGCTTAAAGAACACCTAAAAACTCTTGAGAGCAGTTCCAACAGCATCCTGAGAGCAGTTCCAACAGCATTCATTCATTTAAAAGCATTGCTTATAAGATCGAGTTACGGTTGCGAAGTTATTCAGCTTAAAGAACACCTCAAAACTCTTGAAATGGGTTGTAATGAGATGAAGACTAGTAGTCTGCTTTTGAAATTCCTTAAGGCCATTCTCAAAGCTGGAAACCCAATGAATGTTGGAACTTCAAGAGGCAATGCTCATGCTCAGTTTGAAGCAAGACAACAAGCTAGTAATCAAAAGCACAACCTTAACAGTAGCACTGGTGAAACAAGCAACACCAATGAACCACATTCAGATAACCGGGTACAAAAAGAGGAAGTTAAAGAGTATCTAGTGTTAGGAGGTCTAAGGGACGAGTTATGTGAAGTAAAGAAAGCAGCAAGCATTGAGCATCAGAATTTCTCTAGTATGTACTCTATTCCCAATGCTTATGTTACTAAAATTCGACAGATTATAACATGCTTTGGCAACAGTGAGAGGGGTGGATTTATTAAGGTAATGAAAGGGTTTCCAGAGGAATGTGAAGTGGAGCCTAAGGTGGTGAGAGAGGAACAAGAAATGGTCATGGAACTGCTGAAGAAAACCAATGAGTATTATCTAACAGGAGGTTCCAAAGATAACATATCGAACCCCTTTCAACTGTTTATTACAGTAAAAGAATTTCTTGACATGGTAGATGAGGTTTGCAAAGAACTTAGAAGGCAGCTAGAAAAAACTAATGCAGGAGGAGAAGCTGTATCAACACCACCACTTTCACCATCAAAGAGGGCACCACTCAGATTAACAAACTTCAATTACATTTTCGGCCAAGCACGTCAGGAGTAA 1110 0.3964 MHSMLAKNILSAETLEKLAKIAPTQEEAKIMQFSDNPDKLVDAESFLYHILRAVPTAFIHLKALLIRSSYGCEVIQLKEHLKTLESSSNSILRAVPTAFIHLKALLIRSSYGCEVIQLKEHLKTLEMGCNEMKTSSLLLKFLKAILKAGNPMNVGTSRGNAHAQFEARQQASNQKHNLNSSTGETSNTNEPHSDNRVQKEEVKEYLVLGGLRDELCEVKKAASIEHQNFSSMYSIPNAYVTKIRQIITCFGNSERGGFIKVMKGFPEECEVEPKVVREEQEMVMELLKKTNEYYLTGGSKDNISNPFQLFITVKEFLDMVDEVCKELRRQLEKTNAGGEAVSTPPLSPSKRAPLRLTNFNYIFGQARQE* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0790 369 PANTHER FORMIN-RELATED 91 162 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso17g0790 369 PANTHER FORMIN-RELATED 165 363 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso17g0790 369 PANTHER FORMIN-RELATED 10 87 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso17g0790 369 MobiDBLite consensus disorder prediction 167 192 - -
Gso17g0790 369 MobiDBLite consensus disorder prediction 167 197 - -
Gso17g0790 369 Gene3D Formin, FH2 domain 93 340 IPR042201 -
Gso17g0790 369 Gene3D Formin, FH2 domain 1 92 IPR042201 -
Gso17g0790 369 SUPERFAMILY Formin homology 2 domain (FH2 domain) 94 335 - -
Gso17g0790 369 SUPERFAMILY Formin homology 2 domain (FH2 domain) 8 92 - -
Gso17g0790 369 Pfam Formin Homology 2 Domain 202 320 IPR015425 -
Gso17g0790 369 Pfam Formin Homology 2 Domain 8 92 IPR015425 -
Gso17g0790 369 Pfam Formin Homology 2 Domain 92 163 IPR015425 -
Gso17g0790 369 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 346 IPR015425 -
Gso17g0790 369 PANTHER FORMIN-LIKE PROTEIN 10 87 - -
Gso17g0790 369 PANTHER FORMIN-LIKE PROTEIN 91 162 - -
Gso17g0790 369 PANTHER FORMIN-LIKE PROTEIN 165 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0790 Gso-Chr17 7350125 7351326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0790 1 349 FH2 protein (formin) Gene Family AT1G70140 32.216 1.80e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0790 - - gmx:100795805 720.309