Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0789 ATGGCTATTACCGGCGATATTTTCCGGCAGAGCATAACGGAAATGCTTGCGGAGTCCCCTTCCGGTGCGCCAGAACTTCACGTTCTCGCCGTCGATGACAGCCTCGTTGATCGCAAGGTGATCGAACGGTTGCTGAAGATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGCGCTCTTCAGTATCTTGGGTTGGAGGGAGAGAACGGTTCTCTTGGGTTTGATAGTGTTAAGGTTAATCTCATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCTGTGTTTAGAGAGATTCCGGTGGTGATCATGTCATCGGAGAATGTTTTGACCCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGATTTTCTGTTGAAGCCAGTCAAATTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGGTGAGAAAATATCTCACAAAAGAATGAGGTCAATTGATTGCAGTCCACCTCTAACTGCAACATGCTCACTATTGTCTCTTCCATGCGATCCATCACCATCATTACTCTCACCATTATCCACGAAGAAGGCTAGATTGTGA 624 0.4583 MAITGDIFRQSITEMLAESPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMKGKVKEGEKISHKRMRSIDCSPPLTATCSLLSLPCDPSPSLLSPLSTKKARL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0789 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 207 IPR045279 GO:0009736
Gso17g0789 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 207 - -
Gso17g0789 207 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Gso17g0789 207 SMART REC_2 26 151 IPR001789 GO:0000160
Gso17g0789 207 Gene3D - 26 173 - -
Gso17g0789 207 CDD REC_typeA_ARR 28 150 - -
Gso17g0789 207 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Gso17g0789 207 SUPERFAMILY CheY-like 25 156 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0789 Gso-Chr17 7344644 7347013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0789 26 169 Response Regulator Gene Family AT3G48100 77.931 9.26e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso17g0789 Response_reg 1.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0789 K14492 - gmx:100796843 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0275 5 2878895 2881366 Gso17g0789 17 7344644 7347013 GST