Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0765 ATGATGGCAGCTCGCAGTCTTTGCAGGCTACTCTCTCGCTCTCTCTCTTCTTCCAATTCTTCTGGAGCTGCTTCTCTGCTTCACTCACTAGGAAGAAACCCTGGAGGGTGGAGAAACATTAACAGATTTAGCACGGCTGCAGCAGTTGAGGAACTAATCACTCCACAAGTTTCAATACGTTACACACAGAACCTGATAAATGGGCAATTTGTGGATGCTGCATCAGGGAAAACATTTCCAACATATGATCCGCGCTCAGGAGAAGTGATTGCTAAAGTTGCTGAAGGGGATGTTGAAGATATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAGGGACCTTGGCCTAAAATGACTGCATATGAAAGAAGTCGTATATTGCTGCGCTTTGCTGATTTGGTTGAGAAACACAGCGATGAGCTTGCTGCTCTCGAGACATGGAATAACGGAAAGACTTATGAACAGGCTGCCAAGACTGAATTACCAATGTTCGTGCGTTTATTTCACTATTATGCTGGTTGGGCAGACAAAATTCATGGGTTGACAGTGCCAGCTGATGGAGATTATCATGTGCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTCTAGTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTTCTGAAGACTGCTGAGCAAACTCCACTGACAGCTCTCTTTGTAGCAAAACTATTTCATGAGGCTGGTCTTCCTGATGGTGTTCTGAATGTAGTTTCTGGGTACGGTCCAACTGCTGGCGCAGCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCATTTACTGGCTCAACAGATACCGGAAAAGTTGTACTCGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCGCCTTTCATAATATGTGAGGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCCGGCTCACGTACCTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGACGTGTTGTTGGTGATCCATTCAAGAAAGGTGTTGAACAAGGTCCTCAGATTGACGTGGAACAATTTGAGAAAGTCCTTAGGTACATAAGGTCTGGAATTGAAAGCCATGCCACCCTTGAATGTGGGGGTGATAGATTGGGCTCAAAAGGCTTCTTTGTCCAGCCAACTGTCTTCTCAAATGTTCAGGATGACATGTTGATAGCACAAGACGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAATTCAAGGACATTGATGAAGTAATACGACGGGCAAATAAAACACGCTATGGTCTAGCAGCAGGTGTGTTTACTAAGAACGTGAGCACAGCCAACACATTGATGCGGGCACTGAGAGCTGGAACTGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGTGGATACAAGATGAGTGGTATTGGCAGGGAGAAAGGAATCTACAGTCTTCACAACTACCTGCAGGTGAAAGCTGTTGTCTCACCAGTGAAGAATCCTGCGTGGCTATAA 1629 0.4494 MMAARSLCRLLSRSLSSSNSSGAASLLHSLGRNPGGWRNINRFSTAAAVEELITPQVSIRYTQNLINGQFVDAASGKTFPTYDPRSGEVIAKVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSDELAALETWNNGKTYEQAAKTELPMFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLFHEAGLPDGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIICEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDVEQFEKVLRYIRSGIESHATLECGGDRLGSKGFFVQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDIDEVIRRANKTRYGLAAGVFTKNVSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPVKNPAWL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0765 542 SUPERFAMILY ALDH-like 55 535 IPR016161 GO:0016491
Gso17g0765 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Gso17g0765 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 29 542 - -
Gso17g0765 542 CDD ALDH_F2BC 59 533 - -
Gso17g0765 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 314 503 IPR016163 GO:0016620
Gso17g0765 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 532 IPR016162 GO:0016491
Gso17g0765 542 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 29 542 - -
Gso17g0765 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Gso17g0765 542 Pfam Aldehyde dehydrogenase family 70 532 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0765 Gso-Chr17 7107834 7112626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0765 2 542 Aldehyde Dehydrogenase Gene Family AT3G48000 78.413 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0765 K00128 - gmx:100811501 958.747