Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0758 ATGAAGAACTTGTACTGGTTCAAAGAGATTTCTAACAACGTGAGATCAGGGAGAAGGCTTTCACTAGGGGAATACAAGAGAGCAGTATCATGGTCAAAGTATTTGATCTCTTCTGGGGCAGCCATAAAGGGAGAAGGAGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGTTCATAGGGTCAAAATTTGCCTCTGGAAGGCATAGCAGGATCTACAGAGGCATCTACAAGCACATGGATGTTGCAATTAAGCTGGTGAGTCAACCTGAGGAGGATGAGGAATTGGCTGTTTTGCTTGAGAAGCAATTCACTTCTGAGGTTGCTTTGCTCTTTCGATTGCGCCATCCAAATATCATCACTTTTGTTGCAGCTTGCAAGAAACCTCCTGTCTTCTGTATAATTACTGAATATTTATCTGGGGGTTCCTTAAGAAAATACTTGGTTCAGGAAGGACCACATTCAGTTCCTCTCAGAGTTGTTCTGAAATTAGCCTTAGACATAGCACGGGGAATGCAATATCTTCATTCTCAGGGTATACTTCACAGAGATCTCAAATCAGAAAACCTGCTGTTGGGGGAAGATTTGTGTGTAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCCCAGACAGGCAGTGCAAAAGGATTCACTGGAACATACCGTTGGATGGCTCCTGAAATGATCAAAGAAAAGCGTCACACCAAGAAAGTAGATGTCTATAGTTTCGCCATAGTTCTGTGGGAACTATTAACAGGATTGACGCCATTTGACAACATGACACCAGAGCAAGCAGCATATGCTGTGACTCACAAGAATGAAAGGCCCCCGTTGCCATGTGACTGTCCAAAGGCTTTTAGTCACCTCATCAACAGATGTTGGTCAAGCAATCCAGATAAAAGACCACATTTTGATGAGATAGTCGCAATTTTGGAGAGCTACACTGAAGCACTTGAGCAGGATCCAGAATTTTTCTCTACTTACAAACCATGTCCTAATAATATAATTCTTAGATGCTTGTCAAAATGTAATAATATATTTGCTTCTTGCAAAGCTTAA 1059 0.4164 MKNLYWFKEISNNVRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEELAVLLEKQFTSEVALLFRLRHPNIITFVAACKKPPVFCIITEYLSGGSLRKYLVQEGPHSVPLRVVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDLCVKVADFGISCLESQTGSAKGFTGTYRWMAPEMIKEKRHTKKVDVYSFAIVLWELLTGLTPFDNMTPEQAAYAVTHKNERPPLPCDCPKAFSHLINRCWSSNPDKRPHFDEIVAILESYTEALEQDPEFFSTYKPCPNNIILRCLSKCNNIFASCKA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0758 352 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Gso17g0758 352 CDD STKc_MAP3K-like 64 311 - -
Gso17g0758 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Gso17g0758 352 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Gso17g0758 352 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Gso17g0758 352 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Gso17g0758 352 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Gso17g0758 352 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Gso17g0758 352 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Gso17g0758 352 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Gso17g0758 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Gso17g0758 352 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 333 - -
Gso17g0758 352 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0758 352 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0758 352 Pfam Protein tyrosine and serine/threonine kinase 59 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0758 Gso-Chr17 7019291 7022816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0758 30 320 MAP Kinase Kinase Kinase AT1G62400 65.085 2.70e-138 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso17g0758 PK_Tyr_Ser-Thr 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0758 - - gmx:100785212 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0758 17 7019291 7022816 Gso6g1536 6 15784568 15789677 PCT