Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0746 ATGCAGAGCACAGTTTTCTCTCTCTCCCCTTCCCTCTCTCTCCCAAAACAACCTCTCAAACGCTCTGTCTCTGTTTCCACTTCCAAACTCAACGTCATTCTCACTCCCTCTTCATTCCCATGTCAACCATGTTCTCTTGCTTATTCTCCATCTTTCAAACTCGCTCCCTCACACTTTCACCCCTTCCATGCCAGAGCAACCTCCGTGCCGGAGAGCAGCGCCGGCAACACTCTGCTCAATACTCTGGAACTTGGAGCCCTGTTTGGGCTCTGGATCCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTCTTAAAGGTCTACCATTTCCCTTTAACCGTAAGCACCCTTCAGTTCGCTGTGGGGTCTCTCTTCGTAGCATTCATGTGGAGTTTCAATCTCTATAAGAGACCTAAAGTTAGTGGCGCCCAGCTTGCAGCGATATTGCCACTGGCTCTAGTACATACTTTAGGGAACCTTTTCACCAACATGAGTCTCGGACAGGTTGCTGTGTCTTTCACTCACACTATAAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGGCGCCTACTGCATGGGTTGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGCGTTAGCGTCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACTAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAACAAGGAGGAATCTATGGACAACATAACCCTCTTCTCAATAATAACGGTTATGTCATTCTTGTTATCAGTACCTGTAACTTTGTTGATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCACTTCTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCACCAATTAACGCATTGGGGACTGCTATAGCTCTTGCTGGTGTTTTCTTGTATTCCAGGGTGAAGCGACTTAAGCCAAAGACAACTTAA 1149 0.4543 MQSTVFSLSPSLSLPKQPLKRSVSVSTSKLNVILTPSSFPCQPCSLAYSPSFKLAPSHFHPFHARATSVPESSAGNTLLNTLELGALFGLWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAVGSLFVAFMWSFNLYKRPKVSGAQLAAILPLALVHTLGNLFTNMSLGQVAVSFTHTIKAMEPFFSVLLSAMFLGEAPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEESMDNITLFSIITVMSFLLSVPVTLLMEGVKFTPAYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALAGVFLYSRVKRLKPKTT* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0746 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 217 - -
Gso17g0746 382 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 82 380 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gso17g0746 382 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 21 378 - -
Gso17g0746 382 PANTHER SOLUTE CARRIER FAMILY 35 21 378 - -
Gso17g0746 382 Pfam Triose-phosphate Transporter family 83 372 IPR004853 -
Gso17g0746 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 298 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0746 Gso-Chr17 6882370 6886461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0746 1 380 Antiporters AT5G33320 67.327 3.58e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0746 K15283 - gmx:100780925 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0746 17 6882370 6886461 Gso4g1551 4 44909490 44913652 PCT
Gso17g0746 17 6882370 6886461 Gso6g1525 6 15578068 15583052 PCT
Gso4g1551 4 44909490 44913652 Gso17g0746 17 6882370 6886461 PCT
Gso6g1525 6 15578068 15583052 Gso17g0746 17 6882370 6886461 PCT