Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0741 ATGTTTATATTTTATTTTAATTCAAAACTTTCATCTCAATTGATTTTCTTTCTATTTCTTTACACTCTACCTCGGGGGATGCTTGATCCTCATTCTTTAAAACTGAGAGAACAAATAGAAAAAGAGAAACAAAAAATGACGCAGTTATTCAATCTTATTAGTACCTGGCTAATACTGACATCGTCCTCGTTATTAATCCCACATGCGGCTTCCTACGACTTTGGGATACACGAGACGGGTCTCACGTGCGGGGCTTCTGAGAGCCCAGGATCGAGCGCGTCCAAGTTCATGGCCATAATGGACACGGTGTCGTTTCAGGTCAAAGAGCGAGGCTGGGGAGCGCAGACGCTCCTCGGTTCCGGGCCTCCGATGTACGCATTGGGCCAGTGCCGCCGCGACCTGAGGCCCACGGAGTGCTACACGTGCTTCACCCAAGCGAGGCAGGTGCTATCGCGGTGCGTGCCCAAGACAGCTGGCAGAATCTACCTCGACGGATGCTTCCTCCGCTACGACAACTACTCGTTCTTCCGCGAAAGCGTGGACCCCACGCGCGACATCAGCGTCTGCCAGTCGTCGCCGGGGCTTCGGAAAGACGGGGAAGGACGGGTGGCAGCAGCGGTGGCGAACGCGACGAAGGGCGCGGCGGAGTGCGGGTTCGCGGTGGCCGGAGTAGAGGGGGTTTTTGCGTTGGCGCAGTGCTGGGGGACGCTGGATAAAGGGACGTGCGAGAGATGCTTGAATGCAGCGGGGACAAGAGTGCAGGAATGTGTGCCTAATGCTCAGGGTAGGAGTCTGTTTACTGGTTGCTTTTTGAGGTACTCAACGCGCAAGTTCTACAACGACGTTGCACTGCATGGCATCAAGGATTCTACAAATTCTAGAGAAGGGCCTAGTACTGTCTGGTTGATGGTTGCATGTGTATTATTAGCGATTGTAGGGCTTTTGCTCGTCGTCCTTGCTGCATTTATATGCCGGAAAAGAATAGCATCATCGCGTAGAAATAAAATAAGCGACAGTTGCGGTGCGTCACCTGGTTTTGCCTACGTGACTGGCTTCAGTTTTAGGTACGATTTGCTTGAGAAGGCCACAAACTATTTCGATCCCGCAAACAAATTAGGGGAGGGTGGAGCTGGTTCTGTGTTCAAAGGAACCCTGCCCTCGGGAGGGACCGTTGCTGTTAAACGACTGTTTTTTAATGCCCGGCAATGGACAGAGGGGTTCTTCAATGAGCTCAACTTGATCAATGAGATTCAACACAAGAACGTGGTGAAGCTTTTGGGGTGCAGCATTGATGGTCCTGAAAGCCTTTTGGTTTATGAATTTGTGCCCCGTGGAAATCTTGATCAAGTCCTTTTCGGTAAGAACTCAGAAAATGCTCTGAACTGGGAACAACGGTTTCGAATCATATGTGGGATAGCTGAGGGCTTAGCATACCTTCATGGAGGCCCTGGAAAAAAAATTATTCACAGAGACATAAAGTCCAGCAACATTCTATTTGATGAGAATCTTAATCCAAAAATAGCTGATTTTGGTCTTGCTCGTAGTGTTGCTGAAAACAAATCTCTTCTTAGCATAGGAAATGCGGAGACACTGGGATATATGGCTCCTGAGTATGTTATCAACGGACAATTGACAGAAAAGGCAGATATCTATGCTTTTGGGGTATTGGTTATTGAAATTGTCAGTGGTAAGAAGAACAGTGATTATATACCAGAGTCAACTTCAGTACTCCACAGTGTGTGGAAAAATTACAATGCAAATATTATCACATCATCCGTTGATCCCACTCTACATGGCAAGTTTACGGCAGAAGAGGCATCAAATGCACTCCAAGCTGGCCTTCTTTGTACACAGTCTTCTGATACTCTCAGACCATCCATGTCTGAAGTAGTTCAGATGCTAACAAAGAAAGACTATGTTATTCCCTCCCCAAATCAACAACCATTCCTCAATTCCATAGCCCGCATTCTATCCTCAAATGGGCATGCAAGTGCAAGATCCTCCTTCCACAGCACCACCAGTTCCCTAATTCCAAATGATGATGTAACAGTACTTGAGAATTCATTTTCTCCTTATTCCAGGTTCAACCCTACGGGGAGTCCTGACTCAAATATCCAAATATTGGGGTACCTGAGCCAAGGTAGGTGA 2148 0.4758 MFIFYFNSKLSSQLIFFLFLYTLPRGMLDPHSLKLREQIEKEKQKMTQLFNLISTWLILTSSSLLIPHAASYDFGIHETGLTCGASESPGSSASKFMAIMDTVSFQVKERGWGAQTLLGSGPPMYALGQCRRDLRPTECYTCFTQARQVLSRCVPKTAGRIYLDGCFLRYDNYSFFRESVDPTRDISVCQSSPGLRKDGEGRVAAAVANATKGAAECGFAVAGVEGVFALAQCWGTLDKGTCERCLNAAGTRVQECVPNAQGRSLFTGCFLRYSTRKFYNDVALHGIKDSTNSREGPSTVWLMVACVLLAIVGLLLVVLAAFICRKRIASSRRNKISDSCGASPGFAYVTGFSFRYDLLEKATNYFDPANKLGEGGAGSVFKGTLPSGGTVAVKRLFFNARQWTEGFFNELNLINEIQHKNVVKLLGCSIDGPESLLVYEFVPRGNLDQVLFGKNSENALNWEQRFRIICGIAEGLAYLHGGPGKKIIHRDIKSSNILFDENLNPKIADFGLARSVAENKSLLSIGNAETLGYMAPEYVINGQLTEKADIYAFGVLVIEIVSGKKNSDYIPESTSVLHSVWKNYNANIITSSVDPTLHGKFTAEEASNALQAGLLCTQSSDTLRPSMSEVVQMLTKKDYVIPSPNQQPFLNSIARILSSNGHASARSSFHSTTSSLIPNDDVTVLENSFSPYSRFNPTGSPDSNIQILGYLSQGR* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0741 715 Gene3D Phosphorylase Kinase; domain 1 331 441 - -
Gso17g0741 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Gso17g0741 715 SMART serkin_6 366 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0741 715 ProSiteProfiles Gnk2-homologous domain profile. 74 175 IPR002902 -
Gso17g0741 715 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Gso17g0741 715 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 48 714 - -
Gso17g0741 715 Pfam Protein tyrosine and serine/threonine kinase 370 586 IPR001245 GO:0004672|GO:0006468
Gso17g0741 715 CDD STKc_IRAK 372 636 - -
Gso17g0741 715 ProSiteProfiles Gnk2-homologous domain profile. 177 278 IPR002902 -
Gso17g0741 715 Gene3D - 84 175 IPR038408 -
Gso17g0741 715 Gene3D - 200 278 IPR038408 -
Gso17g0741 715 SUPERFAMILY Protein kinase-like (PK-like) 352 658 IPR011009 -
Gso17g0741 715 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 48 714 - -
Gso17g0741 715 Pfam Salt stress response/antifungal 218 275 IPR002902 -
Gso17g0741 715 Pfam Salt stress response/antifungal 112 173 IPR002902 -
Gso17g0741 715 ProSiteProfiles Protein kinase domain profile. 366 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0741 Gso-Chr17 6846598 6852208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0741 96 675 Receptor kinase-like Gene Family AT1G70520 42.454 2.07e-148 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso17g0741 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0741 - - gmx:100780384 1395.56