Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0718 ATGGAAGATGTGAATCGCACCCCAAGAGAAGCAAAAGATTACTATTCTAGATCAATATGGTTGTCAGAAACGGCACAGGCATTTGGGAATCTCAAGAGAAGTGACAGAGATAATGTTAATGGCAGAGATTCCTACGGCTATAACTTCCAAGAAATTGTGACTCCTGAAGTTTCTGGAGCATTTGATGAAATCAAAGGTTTAATCAGAGTTAATGATGAGGTTATTGGCGAAGAAGAAAACGGTGACTATGGCCACTATTCTAGACAATCGTTGACAACAGAAATTGTGGAGATAGTTGAAGATGGCAAGAGCATAAGCAACAAAGATAGAAGAGTTGACGATCTTTATGTGGCTGTAGGCAAAGATGACTTGAATGTAGTGAAATGGGCTCTTGATCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACCTTGATTCCTACGCCAGTTGGAAAGTTTGAAAGAAGTCAACTAACCCCGCAACAAGTGAGACTATACGTGAATGAGGTGAACAACAAGAGGAAGGATCTTTTGCAAAAGTACATTCAGATGAGTAATGAAGCCAAGGTAACTGCAGAAACGTTGCTCCTGGAAAGCAATGACAAAGGAAAAGCAATTCTGGACCTCATCTCTATTCTTACCATAACCAACATTGTCATCGGAATCAAAAAACTACCATTCACACGGCGCAATAACAAATTGAGCAAAGGAGAGTTCATAAAGAAACATGCACCGAGCTCCTGCGAAGTTACCTTGGTTTATAACGGCAAGGTGTTAGTGTCCGACCCTTACATGAATGGCTTGGTATCCAACGGCATAACATCACAAAATAAAAGTCACTTGAAAAACAACTTCTTTCAGTGCATGTGCTTTTCAGGGTGCGTGAGAGAAGACAATGGTAGTAGCTAG 930 0.4097 MEDVNRTPREAKDYYSRSIWLSETAQAFGNLKRSDRDNVNGRDSYGYNFQEIVTPEVSGAFDEIKGLIRVNDEVIGEEENGDYGHYSRQSLTTEIVEIVEDGKSISNKDRRVDDLYVAVGKDDLNVVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIQMSNEAKVTAETLLLESNDKGKAILDLISILTITNIVIGIKKLPFTRRNNKLSKGEFIKKHAPSSCEVTLVYNGKVLVSDPYMNGLVSNGITSQNKSHLKNNFFQCMCFSGCVREDNGSS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0718 309 CDD STK_N 116 263 - -
Gso17g0718 309 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 122 252 - -
Gso17g0718 309 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 304 - -
Gso17g0718 309 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 304 - -
Gso17g0718 309 Coils Coil 174 194 - -
Gso17g0718 309 Gene3D HUPs 117 259 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0718 Gso-Chr17 6585413 6588647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0718 113 268 U-box Gene Family AT3G61390 30.247 8.64e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0718 - - gmx:100816919 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0347 5 3644119 3647005 Gso17g0718 17 6585413 6588647 GST