Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0716 ATGTCTCATTCCAAAACCCCCGCTGCCGGCGAAACTCTATTTTCCGGCACGGCGTTCCTGATTCTCCTCCACCTCTTTCTCTTCCTTACTCCCGCACTTTCCCTTGACTTCCTATTCAACTCCTTCGCCGGCGTCACCAACCTCACTCTCATCAAAGACGCTCGCGTCGACGCCTCCGTCATCCGAATGAACAACGACTCCAATCAGTACTCCTACGGCCGCGCCTTCTACCCCGTCAAAATTCCCATGCTCAAAACAAACACCTCCAATAACTCCTCTTCCATTTCTTCCTTCTCCACTTCCTTTGTCTTCTCCATCTTGCCGCAGATCTCTACCAGCCCCGGCTTCGGCCTCGCCTTCGTCCTCTCCAACACCACCGACCCTCCCGGCGCCATCGCCAGCCAGTACTTCGGCCTATTCACCAACGCAACCTCCCCTTCCGTTTTCCCCCTCGTCGCCGTCGAATTCGATACCGGCCGCAACCCCGAGTTCAACGACATCGACGACAACCACATCGGAATCGACCTCAACAACATCGAGTCCATAAACGCCACCACTGCCGGCTACTTCAACTCCTCCGGCGCCTTCGTGCCGGTGCGCATGCGCACCGGCCAGAACATCCACGCCTGGATCGACTTCGACGGCGAGAATCTCGAGTTCAACGTAACCGTCGCGCCAATCGGCGTTTCGCGCCCTACGAAACCTACTCTTCGGTATCAGAATCCCGCCATAGCTGACTACGTGTCCAGTAACATGTACGTAGGGTTTTCCGCTTCGAAAACGAACTGGATCGAGGCGCAGAGAGTTCTCGCATGGAGCTTCAGCGATTCAGGACCTGCAAGGGAGCTCAACACAACGAATTTACCAGTTTTTGAACTAGAATCGTCTTCTTCCTCGCTTTCTAACGGCGCAATAGCGGGCATCGTCATCGGTTCTTTTATTTTTGTTCTTATATGCGCTTCTGGTTTTTACTTATGGTGGCGAATGAACAAAGCGAACGAGGAAGAAGACGAGATCGAAGACTGGGAGCTAGAGTACTGGCCGCACAGATTTTCCTACGAGGAACTAAGTTACGCGACAGGGGAATTTCGGAAGGAGATGCTGTTAGGTTCGGGAGGGTTCGGGAGAGTGTACAAAGGAACATTGCCTAACAACACGGAAATTGCGGTGAAGTGCGTGAACCACGATTCAAAGCAAGGGTTGCGTGAATTCATGGCGGAGATTTCAAGCATGGGGAGGCTTCAGCACAAGAACTTGGTTCAAATGAGAGGATGGTGCAGAAAGGGGAACGAGCTTTTGCTGGTTTATGATTACATGCCAAACGGGAGTCTCAACAAGTGGGTTTTCGATAAGTCCGACAAGGTTTTAGGGTGGGAGCAACGCCGTCGTATACTTGTCGACGTGGCAGAGGGGCTTAACTACCTTCACCACGGTTGGGACCAGGTTGTTATTCATAGAGATATTAAATCGAGCAACATTCTGTTGGACGCCGACATGAGAGGGAGATTAGGGGACTTTGGTCTGGCCAAGCTTTACACGCACGGGGAGGTTCCCAACACCACGCGTGTGGTGGGGACGTTGGGCTACTTGGCGCCGGAGCTGGCCACGGTGGCGGCCCCCACTTCGGCGACCGACGTCTACAGCTTCGGGGTGGTGCTGCTGGAGGTGGCGTGCGGTAGGCGGCCGATAGAGACGTCGGTGGCAGAGGAGGAGGTGGTGCTCATTGATTGGGTCAGGGAGCTGTACGCGAAGGGGTGCGCGCGTGAGGCTGCGGATTTGAGGATTAGAGGGGAGTACGATGAGGGAGATGTGGAGATGGTGTTGAAGCTAGGGTTGGCTTGTTGCCACCCTGATCCTCAGAGGAGACCCACCATGAAGGAGGTCGTTGCGCTTCTCTTGGGAGAGGACCCGCCGGAGGCACCCGGAAAAGTCTTGTCCGATTTGGTTCGCGGTGGCGAGGATTCCGACGAGGCCGCGCCTTTGCAACCCTCCCCTCCTCCGGTTTGA 2007 0.5501 MSHSKTPAAGETLFSGTAFLILLHLFLFLTPALSLDFLFNSFAGVTNLTLIKDARVDASVIRMNNDSNQYSYGRAFYPVKIPMLKTNTSNNSSSISSFSTSFVFSILPQISTSPGFGLAFVLSNTTDPPGAIASQYFGLFTNATSPSVFPLVAVEFDTGRNPEFNDIDDNHIGIDLNNIESINATTAGYFNSSGAFVPVRMRTGQNIHAWIDFDGENLEFNVTVAPIGVSRPTKPTLRYQNPAIADYVSSNMYVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFELESSSSSLSNGAIAGIVIGSFIFVLICASGFYLWWRMNKANEEEDEIEDWELEYWPHRFSYEELSYATGEFRKEMLLGSGGFGRVYKGTLPNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELLLVYDYMPNGSLNKWVFDKSDKVLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSATDVYSFGVVLLEVACGRRPIETSVAEEEVVLIDWVRELYAKGCAREAADLRIRGEYDEGDVEMVLKLGLACCHPDPQRRPTMKEVVALLLGEDPPEAPGKVLSDLVRGGEDSDEAAPLQPSPPPV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0716 668 CDD STKc_IRAK 369 632 - -
Gso17g0716 668 PANTHER - 19 655 - -
Gso17g0716 668 Gene3D Transferase(Phosphotransferase) domain 1 439 639 - -
Gso17g0716 668 Pfam Legume lectin domain 35 288 IPR001220 GO:0030246
Gso17g0716 668 Pfam Protein kinase domain 364 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0716 668 SUPERFAMILY Protein kinase-like (PK-like) 344 633 IPR011009 -
Gso17g0716 668 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Gso17g0716 668 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0716 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Gso17g0716 668 MobiDBLite consensus disorder prediction 636 668 - -
Gso17g0716 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 291 IPR013320 -
Gso17g0716 668 Gene3D Phosphorylase Kinase; domain 1 326 438 - -
Gso17g0716 668 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Gso17g0716 668 Gene3D - 33 297 - -
Gso17g0716 668 SMART serkin_6 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0716 668 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 19 655 - -
Gso17g0716 668 CDD lectin_legume_LecRK_Arcelin_ConA 35 278 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0716 Gso-Chr17 6575326 6577788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0716 34 634 Receptor kinase-like Gene Family AT1G15530 68.647 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso17g0716 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0716 - - gmx:100816035 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0348 5 3654410 3656784 Gso17g0716 17 6575326 6577788 GST