Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0710 ATGGAGATTTCTGCCCTAGCTTCTTCTGCTACTCCAAGACCTTCTCTTACAACTCCTTCCACTTCTCCACACACTGTAGTCACCACCACCTTCAGCAAACCTCAACTGAGACGCTCCCACGTAGCAGTATCACTTCCTACCTCAACCACCATTTCACTGCTCGCTCTCTTCGCCCCTCCAAGCGAAGCCAAAGCCGCTGTCAGCATCGCCAAAGACCAGATTGTCTCATCTCTCACCCAAGTGGAGAAAACGCTGGATCAGGTTCAGGAAGTGGGTTCGGGTGTGCTGGACACGGCACAGCGTATTGCTGAAGTGATAGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCAATAGTTCAGCAGGCCGGAGAAGAAGCTTTGAAAATTGCTTCCCCTGCCATCTCCGAAGCTTCCAAGAAGGCCCAAGAAGCGCTCCAAAGCTCCGGTGTTGATACTGAACCTGTTATCTCTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGTTGCCAAGCCAATAGCTTCCTCAACCGTCAAAACCATATCTTCTTCAGACCCTACTGTGATTGCTGGAACAGCAGGAGCACTATTTGTTGCTTACCTCCTAATTCCTCCTATCTGGTCTGTCATCTCGTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCCACACAAAACTACGTTTTGATTGATATTAGGTCAGAGAAAGATAAGGACAAGGCTGGTATCCCTCGCCTTCCCTCTAATGCTAAAAACAGGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAGCTCAGAGGGCAGGTCAAGAATGTGAAGAAATTGGAAGCTGAAATAGTCGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAATGTTGTGATCTTGGATTCGTACTCGGACGTAGCAAAAACAGTTGGAAGAACACTAACCAGCCTTGGTTTTAAGAACACATGGATTGTTGCTGATGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGACTAGGAACAGATTCGTATAACTTCTCGTTCGCAGAGGTGCTGTCACCGTCAAGGGTCATCCCTGCGGCTGTGAGAAGTTTTGGCACAACCAGCCAATCTAGCACGAAGCTTCTTCCTGGGGCTGAATAA 1194 0.4791 MEISALASSATPRPSLTTPSTSPHTVVTTTFSKPQLRRSHVAVSLPTSTTISLLALFAPPSEAKAAVSIAKDQIVSSLTQVEKTLDQVQEVGSGVLDTAQRIAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTEPVISAAKTVADAAQQTTKVIEVAKPIASSTVKTISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISTQNYVLIDIRSEKDKDKAGIPRLPSNAKNRMVAIPLEELPSKLRGQVKNVKKLEAEIVALKISYLKKINKGTNVVILDSYSDVAKTVGRTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSQSSTKLLPGAE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0710 397 ProSiteProfiles Rhodanese domain profile. 239 360 IPR001763 -
Gso17g0710 397 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 7 395 - -
Gso17g0710 397 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 7 395 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gso17g0710 397 Gene3D - 226 365 IPR036873 -
Gso17g0710 397 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 347 IPR036873 -
Gso17g0710 397 CDD RHOD 233 347 - -
Gso17g0710 397 Pfam Rhodanese-like domain 230 347 IPR001763 -
Gso17g0710 397 SMART rhod_4 229 357 IPR001763 -
Gso17g0710 397 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0710 Gso-Chr17 6536593 6539656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0710 1 318 Sulfurtransferasese or Rhodanese AT5G23060 66.771 8.00e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0710 - - gmx:100813363 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0128 5 1445871 1448728 Gso17g0710 17 6536593 6539656 GST