Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0700 ATGGGGTGCTCATTCTCCGGTCTGAATGCCTTATACGACTCCGTTAACGGCGGAGGCGATGTTTGGATCAACGAGAACCGTTTCCGCATCGTTCGCCAGCTCGGAGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGACTCCTAATGATTCCGCCGTCGCTGCTGGCCTCTCCAAGAAGCTCAAAGGCTCCTCTCATCTCTCCGATGACGGGACTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAACTGGAGTTGGTTAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCATCCCAATCTGCTGCCACTTCTTGAACATGCGATCATTTCTGTCAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATATTTGTTGTTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAGATAATGAAAGCCAAGAAGGAATTCTATTCCACCTCAGATGTGCTTCAAATATTTCGTCAGCTTTGTGCAGGACTCAAGCACATGCACAGTTTTGATCCTCCTCATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGTCCGGCGAGGAAGCAAATTGGCTCCAGGTCAGAGGCCCTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTGATATAGATGAGAGGACTGACATTTGGTCATTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAATGCACAGGTCAAATGGCCAGCTGGACCCAAGCCTCCATATCCAGAAGCTCTTCATCAGTTCGTGTCATGGATGCTTCAGCCAACGGCTTCTATGCGGCCCAGGATAGATGATATCATTATCCATGTTGATAAGTTAGTTGCGAAGTTTTCTCAATGA 1032 0.47 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGFAYVYLVKETPNDSAVAAGLSKKLKGSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLEHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKIMKAKKEFYSTSDVLQIFRQLCAGLKHMHSFDPPHAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKQIGSRSEALQLQEWASEHCSAPFRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVSWMLQPTASMRPRIDDIIIHVDKLVAKFSQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0700 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Gso17g0700 343 Gene3D Transferase(Phosphotransferase) domain 1 15 342 - -
Gso17g0700 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Gso17g0700 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0700 343 CDD STKc_16 27 337 - -
Gso17g0700 343 PANTHER - 1 342 - -
Gso17g0700 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0700 343 Pfam Protein kinase domain 30 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0700 Gso-Chr17 6463855 6468467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0700 33 333 EF-hand Containing Proteins AT4G04710 24.510 1.31e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Gso17g0700 Pkinase 3.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0700 K08856 - gmx:100810160 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0136 5 1493610 1498489 Gso17g0700 17 6463855 6468467 GST