Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0695 ATGGCAGATGTAACCACCTACCTCCGCCACCACCCCGACTCCGACCCCAACCCCAACCCCAATCCCAACCCCAACCCCAACCCCGACGACGACCAAACCCTAATTCCCTTTCCCTATTGGGATTTGGACTTCGATTTCGACCCCGAATTCCCCTCAAACACTCTCTCCTTCACCGACCGCGAAAATCAGGTCAATTTCATCATGGATCTCTTCCACCAGAGCGTGGAGCAGTCGCAACTCACCGATCCTCTCTCCAACGACGCCGTTTTCGGCGCCATCGATGGAATCGATTTAGGTTTCCCCGCCGCTGACGACTTCTTCGTCGGACAGAGATTCTCCGTCGGATCCGACGAATCGCACACTCACCCACACACGCTCGCGGCGAACGACGACGGCGTCCTAGGGTTCTGCGCGCATTCCAACGAAAACGACGACGTTGCAAGCATCCCTCTCTGCTGGGACGCGCTTCAATTAGAAGAAAACAACAACAACAACAACACCTACGAGGATTTCGAGTGGGAGGAAGTGATGGACGAGAGAGACGTTATCAGCATGCTAGATGACACCGTTTCCGTTTCCCTCGGAATTGAAGAGGAAACAGAAGCAGCAGCAGCAGAAGAAGATGCAGAATCTGAAGTCAGCATTTTGGAGTGGCAAGTTTTATTGAACTCCACCAATTTGGAAGGACCGAATTCGGAGCCTTATTTCGGAGATAGCGAGGATTTCGTTTACACCGCGGAGTACGAAATGATGTTCGGGCAATTCAACGACAATGCATTTAATGGGAAACCTCCGGCCTCCGCCTCCATCGTGAGGAGTCTTCCGTCGGTGGTTGTGACCGAAGCTGACGTGGCAAACGACAACAACGTGGTCGTCGTCTGCGCGGTTTGTAAAGATGAGTTTGGTGTTGGGGAAGGGGTGAAGGTGTTGCCGTGTTCGCATCGTTACCATGGGGAGTGCATTGTGCCGTGGTTGGGGATAAGGAACACTTGTCCCGTTTGTCGCTATGAGTTCCCCACTGATGATGCTGATTATGAGCGGAGGAAAGCGCAGAGATCTGTAATGTGA 1068 0.529 MADVTTYLRHHPDSDPNPNPNPNPNPNPDDDQTLIPFPYWDLDFDFDPEFPSNTLSFTDRENQVNFIMDLFHQSVEQSQLTDPLSNDAVFGAIDGIDLGFPAADDFFVGQRFSVGSDESHTHPHTLAANDDGVLGFCAHSNENDDVASIPLCWDALQLEENNNNNNTYEDFEWEEVMDERDVISMLDDTVSVSLGIEEETEAAAAEEDAESEVSILEWQVLLNSTNLEGPNSEPYFGDSEDFVYTAEYEMMFGQFNDNAFNGKPPASASIVRSLPSVVVTEADVANDNNVVVVCAVCKDEFGVGEGVKVLPCSHRYHGECIVPWLGIRNTCPVCRYEFPTDDADYERRKAQRSVM* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0695 355 SUPERFAMILY RING/U-box 270 341 - -
Gso17g0695 355 PANTHER - 103 354 - -
Gso17g0695 355 PANTHER - 11 86 - -
Gso17g0695 355 SMART ring_2 294 334 IPR001841 -
Gso17g0695 355 Pfam Ring finger domain 294 335 IPR001841 -
Gso17g0695 355 MobiDBLite consensus disorder prediction 1 32 - -
Gso17g0695 355 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 103 354 - -
Gso17g0695 355 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 86 - -
Gso17g0695 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 341 IPR013083 -
Gso17g0695 355 MobiDBLite consensus disorder prediction 15 31 - -
Gso17g0695 355 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0695 Gso-Chr17 6435289 6436867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0695 147 341 C3H Transcription Factor Family AT5G60820 47.442 5.43e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0695 - - gmx:100814798 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0142 5 1531389 1532889 Gso17g0695 17 6435289 6436867 GST