Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0683 ATGGAATCTTGGAGCTATATCCCTGAAGAAAAGGAGTGTGTCTCCAATGAGGCACCCTCACCTCCCAACACTCTCGGGAGGAGTAAAAATTCTTTCTTGGGCTGGGAACTCAAAACCCCATGTGGTTTTTCCACCGACATGTTGGGTTTGGGTCACCACAGCATTGAGAATCAAGGTTTCGAGGAATTGGGGTTTCCTGAAATGTTGGGAAAACACATGTCCGATGATCTAGTTGCCAGTGTTCCAACCAGAAAGGTGGATGGTAATAGACAACAACAACAACACCACAGTGACAGAATCACTGGCACTGTTGTGGATGCCCCAAGTGGGTTTTCTCAAAGAGGGGACTCAAATTCCCTCATCGATTTGAAGCTGGGTCGATTTGCTGAGCATGGAGATTTCACTGATCCAGCGTTTTCCAAAGTTCTGTCTTCTTCTGAGTCATCAACGCCTCCTAAGAGAGTGCGAACTTCAGGGTTACATTCTCAGACTGCATATTGCCAAGTCTATGGCTGCAACAAGGATCTTAGCTCCTGTAAGGACTACCACAAGAGGCACAAGGTGTGTGAGGTTCACTCCAAGACTGCCATTGTTATAGTCAATGGCATTGAGCAAAGGTTTTGCCAGCAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGCAAGCGAAGCTGCCGAAAACGCCTTGCAGGTCATAATGAGCGTAGAAGAAAACCACAAATGGGTATTCACCCAGGAAAGTCTGGGACGTTGCTTCAGCCATGTGGGGATAGCAGATTCCAGGGATCCATGCTAACATCATCTTTTATCCGACCAGAGATGCTTCCAAGTGGGGTCATGTGTTCCGAGAAATATGGTATGAGTGACTTCTGGAGACCTATCAAAGCAGAACACGGGACTGGTTTTAGGAATCTTTCTTCTATGGCTGCAACCAATGGACATCCTCTGCCAAGATCTTTATTTTCATCATATAACGGAAAACAATTTCCCTTTCTTCATGAAAACAGTTCTACATCCACCACAGGAAGCATCTTCTGTGAGAGCAATAGCCACTATCCATCTGCCCTTGGGGCCCAAAATTCTGGATTGAGACCACTATTCCAGGACACTGTAGGAAATGAGGACTTCAGTGTTTTTGATACCTCACCAAATGTTCAAGGATTATCAGGGATTTCAGACTCTTGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCAATCATCAGGAATTCCCTTGGCTCACTCCTTGGTTATTCCAAGCAGTCATAGCCATCACTACAACATGAGTCAGGTCTCTGACAAGATAGGAATAAGCTCACAGACTTCTTCAAGCCGAGTGTCAGATAGTTTTCCACCAGAACTAAATCATGCCGATGGAAGCCATCTCAGTCCTGTATTAATATCAGGCAATAATGATATTATAAACTTTGATATGGCAGATGGTATCTTCCAAGGTTCAGATTACTTGAATGTGAAAGATCGTCTTTCCGATGAAGATGGTGCAACCATTGACTTGCTACAATTGTCATCACAGCTTCAGCGAGTTGAGCATGAGAGGCAATCCTTGCAGGTGAAGCAAGAGAATGATTCTTCTTGCACTCTGCGGATTACATAA 1635 0.4465 MESWSYIPEEKECVSNEAPSPPNTLGRSKNSFLGWELKTPCGFSTDMLGLGHHSIENQGFEELGFPEMLGKHMSDDLVASVPTRKVDGNRQQQQHHSDRITGTVVDAPSGFSQRGDSNSLIDLKLGRFAEHGDFTDPAFSKVLSSSESSTPPKRVRTSGLHSQTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMGIHPGKSGTLLQPCGDSRFQGSMLTSSFIRPEMLPSGVMCSEKYGMSDFWRPIKAEHGTGFRNLSSMAATNGHPLPRSLFSSYNGKQFPFLHENSSTSTTGSIFCESNSHYPSALGAQNSGLRPLFQDTVGNEDFSVFDTSPNVQGLSGISDSCCALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHSHHYNMSQVSDKIGISSQTSSSRVSDSFPPELNHADGSHLSPVLISGNNDIINFDMADGIFQGSDYLNVKDRLSDEDGATIDLLQLSSQLQRVEHERQSLQVKQENDSSCTLRIT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0683 544 PANTHER 1 PROTEIN, PUTATIVE-RELATED 42 544 - -
Gso17g0683 544 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 544 IPR044817 GO:0003677
Gso17g0683 544 Pfam SBP domain 167 240 IPR004333 GO:0003677
Gso17g0683 544 Coils Coil 512 532 - -
Gso17g0683 544 SUPERFAMILY SBT domain 165 244 IPR036893 GO:0003677|GO:0005634
Gso17g0683 544 ProSiteProfiles Zinc finger SBP-type profile. 164 241 IPR004333 GO:0003677
Gso17g0683 544 MobiDBLite consensus disorder prediction 444 468 - -
Gso17g0683 544 MobiDBLite consensus disorder prediction 1 27 - -
Gso17g0683 544 Gene3D - 158 228 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0683 Gso-Chr17 6277550 6282866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0683 121 282 SBP-box Gene Family AT1G69170 56.173 1.00e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gso17g0683 SBP 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0683 - - gmx:100812110 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0156 5 1689321 1694764 Gso17g0683 17 6277550 6282866 GST