Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0682 ATGGTGTCTCTGTGGTTATCAACCGCTGGATCTGTTGTCCACCGTGGTGACTTCTTTACCATCTTACTTCTGCCACTGCTCTTGTGCACTACATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAATTGGCAATATTACAATCAAATGGGATGTCATAAGCTGGACTCCAGACGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGATACTAGGTTGGACATGGGCAAAAAAGGAAGTAATTTGGAATGTAATGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATCCCTCATTGTTGTAAGAAGGACCCAACCGTAGTGGATTTACTGCCCGGAACTCCTTACAACCAGCAGATTGCAAATTGTTGCTCAGGGGGAGTCTTGACCTCATGGGCCCAGGACCCTGAAAATGCAATAAGTTCATTTCAACTTAGTGTTGGTTCAGCTGGAACAACCAACAAAACTGTCAAACTGCCAAAAAATTTTACCCTCAAAGCACCAGGGCCTGGTTATACCTGTGGCCCTGCCAAGATTGTGAAACCAACTAAATTTATTACTAAAGACAAGAGGAGAACCACTCAGGCATTAATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAGAAGACCCCAACTTGCTGTGTTTCTCTCTCATCCTTCTATAACAATACAGTAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTGGCAGCTGTGTAGATCCTAATTCCCCACATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTACAAATACACCTCTAGTCCGGTGCACGAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAGCTTCAATATAAAGAGTACTGGAGGGTCAAGATCACAATTACAAATTTCAACTATAGAATGAACTATTCGCAATGGAACCTTGTTGTGCAGCACCCGAACTTTGATAATGTAACGCAGGTTTTCAGCTTTAATTTCAAGCCACTAACACCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTACTCACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGGTCTTATTCCGAAAGGACAAATCATCCTTCACATTTGATAAGGGATGGGCTTTTCCGCGAAGAATTTATTTCAATGGAGATAACTGTGTAATGCCACCGCCGGATGCCTATCCATGGCTGCCAAATGCAAGTTCGAAACTAATTTTCTCTTTACTGAGTACACTCCTAGGCACTTTAGCTTGTGTGGCAATGTTATTGACTTAA 1365 0.4359 MVSLWLSTAGSVVHRGDFFTILLLPLLLCTTFTSTEAYDALDPIGNITIKWDVISWTPDGYIAVVTMYNFQQYRHIQAPGWILGWTWAKKEVIWNVMGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCSGGVLTSWAQDPENAISSFQLSVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTVVNCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKATNTPLVRCTNHMCPIRVHWHVKLQYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNFKPLTPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSEVLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLIFSLLSTLLGTLACVAMLLT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0682 454 PANTHER COBRA-LIKE PROTEIN 14 453 - -
Gso17g0682 454 PANTHER PROTEIN COBRA 14 453 IPR006918 GO:0010215|GO:0031225
Gso17g0682 454 PIRSF COBRA 10 454 IPR006918 GO:0010215|GO:0031225
Gso17g0682 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0682 Gso-Chr17 6272133 6275853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0682 2 442 COBRA Gene Family AT3G02210 72.912 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0682 - - gmx:100811581 966.452