Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0681 ATGTCATCATCGGAACTCTCCTCTTTCTTTCTTCTCCGTCTATCAGACATACTCAGTTTCGATGTTTTGCTCGGAGTTATGTTTCTAGTTGCCGTGTTCGGCTACTGGCTGGTTCCCGGCGGTCTTGCTTGGGCTTTTTCCAAGTTCAAGCCCGCGATTCCCGGGCCTTCCGGTTACCCGGTGGTGGGTCTGGTTTGGGCTTTCATAGGGCCTCTTACTCACAGGGTCCTTGCTAAGTTGGCTGAAACCTTTGATGCAAAGCCCTTGATGGCGTTCTCTGTGGGGTTCACTCGTTTCATCATCTCTTCTCACCCCGACACCGCCAAAGAGATCTTGAACAGTTCCGCTTTCGCGGATCGTCCCGTTAAGGAATCTGCTTATGAACTTCTCTTTCACCGTGCGATGGGGTTTGCACCCTACGGTGAGTACTGGAGGAACCTGAGGAGGATCTCCGCAACTCACATGTTCTCTCCGAGGAGAATCGCAGCCCAAGGAGTGTTTCGGGCCCGGATTGGAGCCCAAATGGTGAGAGACATCGTGGGCCTGATGGGGAGGGACGGTGTGGTGGAGGTGAGGAAGGTGTTGCATTTTGGGTCGTTGAATAACGTGATGAAGAGCGTGTTTGGGAGGAGTTATGTGTTTGGTGAGGGGGGTGATGGGTGTGAGCTCGAGGGGTTGGTGAGCGAGGGGTATCATTTGCTTGGGGTGTTTAACTGGAGTGACCACTTTCCACTCTTGGGTTGGTTGGATTTGCAAGGTGTGAGGAAGAGCTGTAGGAGTTTGGTTGATAGAGTGAATGTTTATGTTGGGAAAATCATTTTGGAGCATAGAGTGAAGAGGGTTGCTCAAGGTGAGGATAATAAGGCCATTGATACTGATAGTTCTGGTGACTTTGTTGATGTGCTGCTGGATTTGGAGAAAGAGAATAGGCTAAACCACTCTGATATGGTTGCTGTTTTGTGGGAAATGATATTTAGAGGGACTGATACGGTAGCTATCCTTCTAGAGTGGATTCTAGCAAGAATGGTTCTTCATCCAGAAATACAAGCAAAGGCACAATCTGAAATAGACTCTGTGGTTGGGTCTGGGCGTAGTGTGAGTGATGATGACCTTCCAAACCTTCCTTACGTTCGAGCCATAGTGAAGGAAACCTTAAGGATGCACCCACCAGGCCCTCTTCTTTCATGGGCCAGACTTTCTATTCATGACACACAAATTGGCAATCACTTTGTTCCAGCTGGCACCACTGCTATGGTAAACATGTGGGCCATAACTCACGACCAAGAAGTGTGGTATGAGCCAAAACAGTTCAAGCCGGAGCGTTTTTTGAAGGACGAGGACGTGCCAATCATGGGATCTGATCTTAGGTTGGCACCTTTTGGCTCTGGGAGGAGAGTGTGCCCTGGAAAAGCCATGGGCTTGGCCACTGTTGAGCTTTGGCTTGCTATGTTCTTACAAAAATTCAAATGGATGCCCTGTGATGATTCTGGTGTTGACTTGTCTGAGTGTTTGAAGCTCTCCATGGAGATGAAACACTCTCTCAAAACCAAAGTTGTTGCAAGGCCTGTAGTTTCTCTTGCAATGTAA 1587 0.4877 MSSSELSSFFLLRLSDILSFDVLLGVMFLVAVFGYWLVPGGLAWAFSKFKPAIPGPSGYPVVGLVWAFIGPLTHRVLAKLAETFDAKPLMAFSVGFTRFIISSHPDTAKEILNSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPRRIAAQGVFRARIGAQMVRDIVGLMGRDGVVEVRKVLHFGSLNNVMKSVFGRSYVFGEGGDGCELEGLVSEGYHLLGVFNWSDHFPLLGWLDLQGVRKSCRSLVDRVNVYVGKIILEHRVKRVAQGEDNKAIDTDSSGDFVDVLLDLEKENRLNHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGSGRSVSDDDLPNLPYVRAIVKETLRMHPPGPLLSWARLSIHDTQIGNHFVPAGTTAMVNMWAITHDQEVWYEPKQFKPERFLKDEDVPIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMFLQKFKWMPCDDSGVDLSECLKLSMEMKHSLKTKVVARPVVSLAM* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0681 528 Gene3D Cytochrome P450 45 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 SUPERFAMILY Cytochrome P450 53 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Gso17g0681 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0681 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 521 - -
Gso17g0681 528 PANTHER CYTOCHROME P450 78A7-RELATED 5 521 - -
Gso17g0681 528 Pfam Cytochrome P450 54 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0681 Gso-Chr17 6260938 6262931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0681 19 521 Cytochrome P450 AT1G74110 65.517 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0681 K20619 - gmx:100811042 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0157 5 1711030 1713034 Gso17g0681 17 6260938 6262931 GST