Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0676 ATGGCAGCAAAGCTATTGCATTCTTTAGCAGATGACAACCCAGATTTGCAAAAGCAGATAGGATGCATGACTGGGGTTTTCCAACTCTTTGATCGTCACCATATTATTCCTCCTCGCCACATTACCCAGAAGATGCTTCCTCCAGGTAATTCCCACTCCAATTATGACAACCTGGAAAGAGGTTCTAATAGAATACACCAAAGACAATCAGCAGCTGATATAAGGGGTGTGAGTGAAAAACAAAGAATTTCAACGGAATCATCAAGAACCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTTTGGAGTATAAAGCTCAAGCAGGCGCTCCCTTCAACCGGAATGGTTATCCTAAAAGTCCTATGAGGGAGCCAGTTATGAACCAAACAAGTTCCTCTCCCGATTTAAGATGTCAGTCCCTTGATCTGAGGGATGTGGCGAAGGACTCTATGTATAGGGAGGCCAGAGGACTATCTAAAGAAAAGGATTCCCCAACACATTTTCAGCTGTCCAAATCCATCAAAGGAAAACAAACTCCTATTCATCTAAGGGAGTCTCTGAGAGTCCTTGCTAAACTTAGAGAAGCACCTCGGCATTATGTTGAAGCTAAAGAACTTCCAAGATTATCATATGAAGTAAAAGGACATTGGCATTCCATCTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTGGTACATCTTTCGAATCACATGATTCCTTTAAATGCCCACCAAAGCTAAAAGAGCTTGCTAGACATTCACTTGACAGTAGGGAAGGTTCTTGGCGTGCATATGGCTCTGATTCAAAATCCAGTAACCCCTCAAGAAATTTCAATGCAGGTGATGCCTCTACCTCAGTTGACAACGTTTCTAGTCGACAACAACCGTCAGCATCCCAGAGCCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCTTTGCCAGAATCCTATAATGCCAGTGATACTAACTTTAGTTTGAGTGAAACTGGCTCAGCTCAAGGCAATGATCAGTTTTTGAAAAATGGACTCGTCAAGCCACTTCGAGTTCATAATTCTCCTAAAATCTCATTGAAAGACACGACTTCCCCTCGATGGAAGAATCCTGACTTGGCTGTGAAACCAATCTTAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAGCAGCAGGATGGAAACCAAAGCTCTGAGAAACTAACTTCCCGGGCCATAAAAGCTACTGCAAGATCACCAGATTCATTTCCATCAGTTTATTGTGAGATTGAAAAGAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCTCTCAAACGGATACTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACCAGAGAAGAAGAACAAGCTTTAAATGTTGGAAATAAAAGAGACTATGAACTAAATCCGAGTCTTATTCAGCATTCTATATCAGTGAGGCAACAAACAGCCAGGGAAACTGAATCTGTAAAGGCTATAGAATCACCAATTGTGATCATGAAACCAGGAAAACTTATTGAGAAAAGTGGAATTTCTGCTTCTTCAGTCTTTCCAATTGGTGAACTCTCTGATTCCCATAAACTTCGGAGTGGTGGTGTACATGCACATGATAAAAGGGGGACAGCTTCCAATCAAATAGCAAAAGATCAGTCTCTTAGAAACAGTCACTGGAATGCTCCTACCAGTTTTAGTGAAAAGAAAGAAAACAGTATCAGGACTATTAAATCAGCACAATCCCAACCAAGGTCTAAACAACTTCCAAAAGAAAATAGTCCAAGTTCAGTAAAGAATTCGGGATCTGTTAGCCTGAGAATGCAACAGAAGAAGTTAGAGTCTGAGAAGCAATCTAACCTGCCTACCCCACCATCCGATTCAAATAATCCCAGAAGGCAGTCCTTTAAGCAGCCAACAGAATCAGGTTCTCCCAGTCAAAAACTGAGACCTAAAGTTGCTAGTTCACGGTACTGTGATGACCGACTTAGTGAGACTAGCAATGAATTGAGAAGTCTAAGTAGTCAGTGGGATGAAATATCTCTGCAATCAGACAGTATCACAGTTGACTCAAAGATGGATACTGAAGTTACCAGCAGTTTACAATCTGCTGAAATTATTGAAAGCCAATGCTCATCTATGAAGCCTATTGAGCATTTGGTTTCAGGATCAATGCATAAGAAATCAACTCTGAGGTGGAATGAGGATGAGTCAATTGCAGAACCTGCAACATATGCCTCAGATCATCCAAGTCTTGATTCAGTCGATGATGTCTCGGTATACAAATATGATATGCCATCCCCAGTAAAGAGTAAATCCAATGCTCCTAAAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGCTGGAGCAGACCAAGTTAAGTAGTTTGCTTTCGAAAGACAAAAGCAGATTTGGAAAAGCTGCTTACATGAAGCTAAATACAGAGAAGTGGCAGAGGAAACTCATCTTTGATGCTGTGAATGAGATTCTTGGTGAAAAACTAGGCTCTTTTCTTGAGCCATGCTTGAAGCCTAATGAACTCGTAGCAATGAAATTCGTCAGTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGGTACAAAAACTTCAATATGTGAAGCCAGATTGTAGCTTAGAAGATGAGGGAGATGAACTGAAAAGTATGCTACGGGAAGATGTGATGTGTCACTCAGAAAACTGGACAGGTTTCTCAGTTCAATTACCTGGGGTTGTGTTGGATGCTGAGAGACAGATATTTAAGGACTTAATTGATGAGCTTGTGATTGATGAAATGGCTAGTTTGCAAGTGAAATCCGGTAGGCACAGGTAG 2859 0.4127 MAAKLLHSLADDNPDLQKQIGCMTGVFQLFDRHHIIPPRHITQKMLPPGNSHSNYDNLERGSNRIHQRQSAADIRGVSEKQRISTESSRTSFSSSCSSSMSSLEYKAQAGAPFNRNGYPKSPMREPVMNQTSSSPDLRCQSLDLRDVAKDSMYREARGLSKEKDSPTHFQLSKSIKGKQTPIHLRESLRVLAKLREAPRHYVEAKELPRLSYEVKGHWHSISKDAPRFSYDGRETSGTSFESHDSFKCPPKLKELARHSLDSREGSWRAYGSDSKSSNPSRNFNAGDASTSVDNVSSRQQPSASQSRPPSVVAKLMGLEALPESYNASDTNFSLSETGSAQGNDQFLKNGLVKPLRVHNSPKISLKDTTSPRWKNPDLAVKPILSSRFPIEPAPWKQQDGNQSSEKLTSRAIKATARSPDSFPSVYCEIEKRLKDLEFKQSGRDLRALKRILEAMQVKGLLETREEEQALNVGNKRDYELNPSLIQHSISVRQQTARETESVKAIESPIVIMKPGKLIEKSGISASSVFPIGELSDSHKLRSGGVHAHDKRGTASNQIAKDQSLRNSHWNAPTSFSEKKENSIRTIKSAQSQPRSKQLPKENSPSSVKNSGSVSLRMQQKKLESEKQSNLPTPPSDSNNPRRQSFKQPTESGSPSQKLRPKVASSRYCDDRLSETSNELRSLSSQWDEISLQSDSITVDSKMDTEVTSSLQSAEIIESQCSSMKPIEHLVSGSMHKKSTLRWNEDESIAEPATYASDHPSLDSVDDVSVYKYDMPSPVKSKSNAPKGHPINPELFLVLEQTKLSSLLSKDKSRFGKAAYMKLNTEKWQRKLIFDAVNEILGEKLGSFLEPCLKPNELVAMKFVSAQKLLKELCFEVQKLQYVKPDCSLEDEGDELKSMLREDVMCHSENWTGFSVQLPGVVLDAERQIFKDLIDELVIDEMASLQVKSGRHR* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0676 952 PANTHER LONGIFOLIA PROTEIN 786 952 IPR033334 GO:0051513
Gso17g0676 952 PANTHER LONGIFOLIA PROTEIN 1 783 IPR033334 GO:0051513
Gso17g0676 952 MobiDBLite consensus disorder prediction 41 97 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 263 310 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 269 309 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 46 69 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 223 247 - -
Gso17g0676 952 Pfam Domain of unknown function (DUF4378) 784 935 IPR025486 -
Gso17g0676 952 MobiDBLite consensus disorder prediction 156 178 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 556 660 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 83 97 - -
Gso17g0676 952 Pfam DUF761-associated sequence motif 297 325 IPR032795 -
Gso17g0676 952 PANTHER LONGIFOLIA PROTEIN 1 783 - -
Gso17g0676 952 PANTHER LONGIFOLIA PROTEIN 786 952 - -
Gso17g0676 952 MobiDBLite consensus disorder prediction 540 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0676 Gso-Chr17 6209733 6215775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0676 723 952 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.952 1.10e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0676 - - gmx:100809978 1492.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0162 5 1765900 1771742 Gso17g0676 17 6209733 6215775 GST
Gso17g0676 17 6209733 6215775 Gso4g1351 4 39251023 39257341 PCT
Gso4g1351 4 39251023 39257341 Gso17g0676 17 6209733 6215775 PCT