Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0674 ATGAAATCTGAGATAAGCAAAACAGCAACATTTAAGGTACGACACCTCTACATCATATGTGAAGGGGATCAAGGGGAGGCTCAACCGGTTGCCATCGGCGACATGTTCATGGACACCGTCAAGAAGGGAAAGCCTGATCTCCTAAATCCCAAGGGTGAAATGAAAGGCTCTACTATCACTGGTCCAATTGGGAATGAGTGTGCTGAACTCTGGACCAGGATTGTTGAATCCCAGACAACGTCGAATTGTTTTGTCTCTGTTTGA 264 0.4583 MKSEISKTATFKVRHLYIICEGDQGEAQPVAIGDMFMDTVKKGKPDLLNPKGEMKGSTITGPIGNECAELWTRIVESQTTSNCFVSV* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0674 87 PANTHER - 48 76 - -
Gso17g0674 87 Gene3D Ribosomal protein L14 46 80 IPR036853 GO:0003735|GO:0005840|GO:0006412
Gso17g0674 87 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 48 76 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gso17g0674 87 SUPERFAMILY Ribosomal protein L14 16 75 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0674 Gso-Chr17 6191012 6191562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0674 14 80 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 38.462 3.22e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0674 K02894 - pop:18097897 71.2478