LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g0656	ATGTTACCTTGGCTTATCATCGGCTTGGCTACCATCGTAGCAGCTATCCTTAGTTACCGGCTTTTGAAGCTCATAATAAGGAGGCCCTCATTACATCTGCCACCAGGGCCAAGGCCATGGCCCGTTGTGGGAAACTTGCCCCACATAGGCCCTTTGCTACATCGGGCTCTTGCGGTCTTGGCCCGCACTTATGGCCCGCTCATGTATCTCCGCTTGGGCTTCGTTGACGTGGTGGTGGCAGCTTCCGCCTCCGTGGCGGAACAGTTCTTGAAGGTTCACGACGCCAATTTCTCTAGCCGGCCACTGAACTCCATGACCACATACATGACCTATAACCAAAAAGACCTTGCTTTTGCTCCCTACGGCCCACGGTGGCGGTTTCTCCGCAAAATAAGCTCAGTTCACATGTTCTCTGTTAAGGCCTTGGATGATTTTAGACAACTCCGACAGGAAGAAGTGGAAAGATTGACAAGTAATTTAGCAAGTTCAGGCTCTACAGCTGTGAATTTGGGGCAATTGGTGAATGTATGTACCACCAACACATTGGCAAGAGTAATGATAGGACGGCGTCTTTTCAACGATAGTCGTAGTAGTTGGGATGCAAAAGCAGACGAATTTAAATCTATGGTTGTGGAACTCATGGTGTTGAATAGAGTTTTTAATATTGGTGACTTCATTCCTATCTTGGATCGGTTGGACCTTCAAGGAGTGAAATCTAAGACAAAAAAATTACACAAGAGGTTTGATACATTTTTGACTAGCATTCTTGAGGAACACAAGATTTTTAAGAATGAAAAACATCAAGACTTATATTTGACTACATTGTTGTCACTTAAGGAAGCTCCTCAAGAAGGATATAAACTTGACGAATCAGAGATCAAAGCAATACTTTTGGACATGTTTACAGCGGGGACAGACACATCATCAAGCACAATTGAGTGGGCAATTGCTGAACTGATTAGGAATCCAAGAGTCATGGTTCGGGTCCAACAAGAAATGGATATTGTTGTAGGTCGGGATAGGCGTGTGACTGAATTGGACTTGCCCCAACTTCCTTACTTGCAAGCTGTTGTGAAGGAAACATTTCGTCTCCACCCACCAACCCCTCTTTCCCTCCCACGAGTTGCGACGGAGAGTTGCGAGATATTCGATTACCACATCCCCAAAGGTACAACTCTCTTGGTCAATATTTGGGCAATAGGGCGTGACCCTAACGAGTGGATTGACCCATTGGAGTTTAAGCCTGAAAGGTTCCTCCTTGGTGGTGAGAAGGCTGGTGTTGACGTTATGGGCACCAACTTTGAGGTTATACCCTTTGGTGCTGGTCGTAGAATATGTGTTGGTATGGGCCTAGGCCTAAAGGTGGTTCAATTGCTCACTGCCACCTTAGCCCACACATTTGTTTGGGAGTTGGAAAATGGACTTGATCCGAAAAATCTCAACATGGATGAAGCACATGGGTTTATCCTTCAAAGAGAAATGCCTCTTTTTGTTCATCCTTATCCTAGACTTTCACGACATGTGTATTCATCATCATCATCACCATCGTCATCTTCATGA	1560	0.4538	MLPWLIIGLATIVAAILSYRLLKLIIRRPSLHLPPGPRPWPVVGNLPHIGPLLHRALAVLARTYGPLMYLRLGFVDVVVAASASVAEQFLKVHDANFSSRPLNSMTTYMTYNQKDLAFAPYGPRWRFLRKISSVHMFSVKALDDFRQLRQEEVERLTSNLASSGSTAVNLGQLVNVCTTNTLARVMIGRRLFNDSRSSWDAKADEFKSMVVELMVLNRVFNIGDFIPILDRLDLQGVKSKTKKLHKRFDTFLTSILEEHKIFKNEKHQDLYLTTLLSLKEAPQEGYKLDESEIKAILLDMFTAGTDTSSSTIEWAIAELIRNPRVMVRVQQEMDIVVGRDRRVTELDLPQLPYLQAVVKETFRLHPPTPLSLPRVATESCEIFDYHIPKGTTLLVNIWAIGRDPNEWIDPLEFKPERFLLGGEKAGVDVMGTNFEVIPFGAGRRICVGMGLGLKVVQLLTATLAHTFVWELENGLDPKNLNMDEAHGFILQREMPLFVHPYPRLSRHVYSSSSSPSSSS*	520

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso17g0656	519	Gene3D	Cytochrome P450	26	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	PANTHER	FLAVONOID 3'-MONOOXYGENASE	9	500	-	-
Gso17g0656	519	PRINTS	P450 superfamily signature	303	320	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	PRINTS	P450 superfamily signature	356	367	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	PRINTS	P450 superfamily signature	437	446	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	PRINTS	P450 superfamily signature	446	457	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	9	500	-	-
Gso17g0656	519	SUPERFAMILY	Cytochrome P450	34	503	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g0656	519	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	439	448	IPR017972	GO:0005506\|GO:0016705
Gso17g0656	519	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g0656	Gso-Chr17	6084718	6087659	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso17g0656	9	514	Cytochrome P450	AT5G07990	62.863	0.0	662

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g0656	K05280		-	gmx:100807293	1009.59

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso5g0180	5	1915630	1918064	Gso17g0656	17	6084718	6087659	GST
	Gso7g1849	7	41277595	41280170	Gso17g0656	17	6084718	6087659	PCT

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