Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0647 ATGGGAATCCACCTCGGCTTGTTTCTCTTTCTGGCTTCTCTTCGAATGACTTTATCTCAAGATGTTGAACATGGTTCAGTTCTAGTAGATGGAATTCAAGCAATTGCTGAAACTGATGATAACTTCATCTGTGCTACTATTGATTGGTGGCCTCATGATAAGTGTGATTACAACTATTGCCCCTGGGGGGATTCATCTGCTGTAAATTTGGACTTGTCTCATCCTTTCTTTGCCAAGGCAATCCAAGCTCTCAAGCCTTTGAGGATAAGAGTTGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTTGGAAGTTTGAAGTCCCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTACAAATGAAAAGGTGGGATGAGCTGAATCATTTTTTCGATGAGACAGGGGCCCTTGTGACATTTGGTTTGAATGCACTCCGTGGGAGGCATCAGATTAGTCATACTGTTTGGGGAGGAGACTGGGACCCATCCAATGCCAAAGATTTTATCAGTTACACTATTTCAAAGGGGTACAAAATTGATTCATGGGAATTTGGTAATGAGTTGAGTGGGAAGGGCATTGGGGCTAGTGTTGGTGCTGCACAGTATGGGAAAGACTTGATAAAGCTTAAAGAAATTTTACACACATTATACAAAAACTCCACGTTCAAACCTTCCCTTGTAGCACCCGGAGGATTCTATAATAAGGAGTGGTTTGATAAGCTTCTTCAGGTTACAGGTCCAGGCATTGTCAATGTGCTGACTCATCACGTGTATAATTTGGGCCCAGGTAGTGATGAGCATCTTGATAGGAAGATTCTAGATCCTGAGAACTTGAGCAAGATAGAATCAATTTTTAGCAATCTTTCAGAAACCATTCAAAAATATGGCCCTTGGTCTTCTGCATGGGTAGGTGAAGCTGGCGGAGCATTCAACAGTGGTGGTCGTTCAATTTCTAACACATTTGTGAATAGCTTTTGGTACTTAGATCAACTTGGAATAGCATCTAGATACAACACTAAGGTTTATTGCAGGCAGACTTTAATTGGAGGAAACTATGGTCTTCTCAATACCACTACTTTCATTCCAAATCCTGACTACTACAGTGCACTTTTGTGGCGTCAGCTAATGGGGAAGACTGTTCTTGCAGCTAGTAGTGATGTTTTTTCACCATCTTTACGCACTTATGCCCATTGTTCAAAAGGCAGAGATGGTATAACATTACTGCTGATCAATTTAAGCAATCAGACTCATTTCACACTCACGGTTCATGACCGGGTGCCTGTGAGCAATGGAGGAAATGAAAATGCTAAAAGCATCCATACAGAAAACTCATTCTTTAGTCATCTCAAGAGGGCATTTTCTTGGATTGGAACAAAAGGATCAGATGTCACATTCAGGGAGGAGTACCAATTAACTCCAAAAGATGATTACCTTAGAAGCCAAACCATGTTGCTGAATGGTATTCCTCTAGAGTTGACAAATGATGGAGAAATTCCAACATTGGATCCACTACTCAATAATGTACATTCTCCAATACACTTGGCTCCTTTATCCATTGCTTTTATTGTATTCCCCAACTTTGATGCTCCGGCTTGTGCTGAACACAGAAAACTTTAA 1644 0.4094 MGIHLGLFLFLASLRMTLSQDVEHGSVLVDGIQAIAETDDNFICATIDWWPHDKCDYNYCPWGDSSAVNLDLSHPFFAKAIQALKPLRIRVGGSLQDQVLYEVGSLKSPCHPFQKMKGGLFGFSKGCLQMKRWDELNHFFDETGALVTFGLNALRGRHQISHTVWGGDWDPSNAKDFISYTISKGYKIDSWEFGNELSGKGIGASVGAAQYGKDLIKLKEILHTLYKNSTFKPSLVAPGGFYNKEWFDKLLQVTGPGIVNVLTHHVYNLGPGSDEHLDRKILDPENLSKIESIFSNLSETIQKYGPWSSAWVGEAGGAFNSGGRSISNTFVNSFWYLDQLGIASRYNTKVYCRQTLIGGNYGLLNTTTFIPNPDYYSALLWRQLMGKTVLAASSDVFSPSLRTYAHCSKGRDGITLLLINLSNQTHFTLTVHDRVPVSNGGNENAKSIHTENSFFSHLKRAFSWIGTKGSDVTFREEYQLTPKDDYLRSQTMLLNGIPLELTNDGEIPTLDPLLNNVHSPIHLAPLSIAFIVFPNFDAPACAEHRKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0647 547 Gene3D Glycosidases 64 383 - -
Gso17g0647 547 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 546 - -
Gso17g0647 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Gso17g0647 547 PANTHER HEPARANASE-RELATED 1 546 - -
Gso17g0647 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0647 Gso-Chr17 5998128 6002933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0647 3 542 Glycoside Hydrolase AT5G07830 60.662 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0647 K07964 - gmx:100792792 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0192 5 2023143 2028405 Gso17g0647 17 5998128 6002933 GST
Gso2g0963 2 11147562 11151108 Gso17g0647 17 5998128 6002933 PCT