Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0635 ATGAACAGCGAGAGACAGTCGACGACGACGACGTTGCTGCACGGCAAGTACGAGCTAGGTCGTGTGCTGGGGCACGGAAGCTTCGCCAAGGTCTACCACGCGCGGAACCTGAAGACGGGGCAGCACGTGGCTATGAAGGTCGTTGGAAAAGAAAAGGTGATCAAGGTCGGAATGATGGAGCAGGTCAAGAGGGAGATCTCGGTCATGAAGATGGTCAAGCACCCCAACATCGTCGAGCTCCACGAAGTCATGGCCAGTAAGTCCAAGATCTACATCTCCATCGAACTCGTCCGCGGCGGAGAGCTCTTCAACAAGGTCTCCAAGGGACGCTTGAAGGAGGACCTGGCCAGACTCTACTTCCAGCAGTTAATCTCTGCCGTCGATTTCTGCCACAGCCGCGGCGTCTACCACCGTGACCTCAAGCCGGAGAATCTCCTCCTGGACGAACACGGCAACCTCAAGGTCTCCGACTTCGGACTCACCGCCTTCTCCGACCACCTTAAAGAGGACGGGCTGTTACACACCACGTGCGGCACGCCTGCGTACGTGTCACCGGAAGTTATTGCAAAGAAAGGCTATGACGGTGCCAAGGCTGATATATGGTCATGCGGAGTAATCCTCTACGTTCTCCTAGCTGGGTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTATAAAAAAATCCATAGAGGGGACTTCAAGTGCCCACCGTGGTTCTCTCTCGATGCGAGAAAGCTTGTTACGAAACTGCTTGATCCGAATCCGAATACGAGGATTTGTATTTCTAAAGTGATGGAGTCTTCTTGGTTTAAGAAACAGGTGCCGAGGAAGGTGGAGGAGGTGGTTGAGAAGGTCGATTTGGAGGAGAAGATTGAGAATCAGGAGACGATGAATGCTTTCCACATAATCTCCTTGTCGGAGGGGTTCAATTTGTCGCCGTTGTTCGAGGAGAAGAGGAAGGAGGAGATGAGGTTCGCCACCGCGGGGACGCCGAGCAGCGTCATTTCGCGCCTGGAGGAGGTGGCCAAGGCGGGGAAGTTTGACGTGAAGAGTAGCGAGACGAAAGTGAGGCTTCAGGGACAGGAGCGTGGGAGGAAGGGGAAGCTAGCGATTGCGGCGGATATCTACGCCGTGACGCCGTCGTTTATGGTGGTGGAGGTCAAGAAGGACAATGGGGATACGTTGGAGTATAACCAGTTCTGCAGCAAACAACTTCGTCCTGCGCTTAAGGATATCTTCTGGAATTCTGCACCTGCCAGTGCTTGA 1269 0.5351 MNSERQSTTTTLLHGKYELGRVLGHGSFAKVYHARNLKTGQHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKHPNIVELHEVMASKSKIYISIELVRGGELFNKVSKGRLKEDLARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSDHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIHRGDFKCPPWFSLDARKLVTKLLDPNPNTRICISKVMESSWFKKQVPRKVEEVVEKVDLEEKIENQETMNAFHIISLSEGFNLSPLFEEKRKEEMRFATAGTPSSVISRLEEVAKAGKFDVKSSETKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSAPASA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0635 422 PANTHER - 9 420 - -
Gso17g0635 422 Gene3D Kinase associated domain 1, KA1 292 416 - -
Gso17g0635 422 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0635 422 Pfam NAF domain 296 351 IPR004041 GO:0007165
Gso17g0635 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Gso17g0635 422 Gene3D Phosphorylase Kinase; domain 1 9 96 - -
Gso17g0635 422 SUPERFAMILY Protein kinase-like (PK-like) 14 311 IPR011009 -
Gso17g0635 422 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Gso17g0635 422 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Gso17g0635 422 CDD STKc_SnRK3 16 270 - -
Gso17g0635 422 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0635 422 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0635 422 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 420 - -
Gso17g0635 422 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Gso17g0635 422 CDD CIPK_C 299 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0635 Gso-Chr17 5887447 5889228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0635 2 420 CBL-interacting serine-threonine protein kinases AT4G30960 73.441 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso17g0635 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0635 - K07198 gmx:100788568 809.675