Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0632 ATGCTCCGCAAATTGTTCTTCCGCAAGCCTCCTGATGGACTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAGAGTGTACATGGATGGGATAGTTGGTCAACTAAGGGAGAACTTGCCTGATGCTTCGATTCTGATTTTCAATTTTCGGGAGGAGGATACGAAGAGTCAGATGGCGAATATCATGTCTGAGTATGACATTACTATCATGGACTATCCTCGGCACTACGAGGGTGTTCCCGTGCTCAAAATGGAGCTCATTCACCACTTTTTGAGGTCTGGTGAAAGCTGGCTCTCGCTTAGCCAGCATAATGTGTTGCTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATACTGGGGAGCAGAGGACTCTGGATATGGTTTACAGGCAGGCTCCGCACGAGCTTTTGCATTTGTTGTCCCCGTTGAATCCGATCCCTTCCCAACTGAGGTATCTTCTGTATGTTTCCAGGAGGAATGTGGCCCTAGATTGGCCTCCCCTGGACAGGGCACTCATGTTGGACTGCATCATTATCAGATTCTTCCCAAACTTTGAGGGGGAAGGTGGTTGTCATCCCATTTTTAGAATATATGGACAGGATCCCTTTAGTGCTGATAAAAATCCAAAAATGTTGTACTCAACGCCAAAGAGAAGCAAAAATGTCCGGGCCTATAAGCAGGGAGAGTGTGAACTTATCAAAATCGATATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGAGCATTAACTTGAATGGTAACATGGATCGTGAAAAGATGATGTTCCGAGTCATGTTCAACACAGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCCGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATTGCGGATGGTACCTCATGCTTTGAGAAGGAAGGACTTCCAATTGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCCAAGGATGATGCTGCACTAAATGTGCTCCAACAGATGCGTGCTTCAGCTATGAATGACAGGTTGGATACAGTTTCTGATCAGTATGTGGAAAATGGCACTTTATTGCATGAAAAAAGTCCTAGAACGCCTCAGGGGAATTTGAGTGAAGCAAGACAGGGTTTATCCTCTACTAAGAGATCACCAGATAATGACAAGAGTAGAAAAGATGATAAGACCAACAAGGTTGAGGGTATTCCCCAACAACCTAATACATCTAACATCATGTATCAAGAGACAGCCAGATCTTCAGAAAGAACCATGGAATCCAATAAATGTCCAACAGGACCAACAAATCTTGACATAAAACTGCAGGCACCTCATCCTGCCTTATCTTCTTCTGTTGATACTGCTTTTCCCCCTAGAACACCTCCTTTGCGGCCTCGATCCACTAGTGCTAAAGAAGTTCATGATTCTCCTCGCCAAACAGAATCGCCCCCTTCTTATCTTTTGCCTTTGCAATCAAAACACCAATCACAAGACAGAAGTTCTAACCCTACTCCTGGGACCCAATTGTCATCTACTGTTCATAGTAAGTCACCAGAAGACACCATTTCTCATCCTTCATCTTCAGCAATTACTTCACCTCAGCTATCTCCTTCACTTTCTTCCAAAAATGTGAATGAGATTCCTCCTATTAGAACAAGACTAGAGTCTTCCCCTTCACAACCTCCAACTCCACCACCTCCTCCTACCCCTCCACTAAAGGATCATAGACTAGTTCGAGCTAAACCACCTCCACCACCACCTCCTCCTCCTAAGAAAGAAGTACATGTTAAAGCCGGACCCCTTCCTTCTCCTCTATCTCCTATGAATGTGGAGTCACAGGTTAGAGGTGGACCCTCTCCTCCCCCTCCCCCTCTTCCAAAAGAGGAGCGACCTGTTACATTTAATGCTCCTCCACCTCCACCACCTCCTTGTCTCTCGGGGAAAGTTGCAGGTTCTACTATAGCACCTCCACCACCACCACCACCAGCACCTCCACCACCACTTTCCAGAGCATCACTTCCCTCAGATCACATTAATTCTTCGTTGCAAGAGTCTGCACCTCCTCCTGCAGCACCTGCTCCTCCACCTCCTCCTGGGGCACCTGCTGTTCCACCTCCTCCTGGTAAAGGAGGTCTAAAATCAGGCAGTCCGTTTCCATTGTCTCTTTCTGTGAGTGGTGATGGGAATAATGTGTCCGGACCAACTAGCTCAAAGGGACGAATTCTATCACGTACGATCAACTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCAGAGACACAGAAATCTGGCGAAGCTTCCAAGGCCCCAGAGATTGATCTTTCAGAGCTTGAGAATCTCTTCTCAGCAGCAGTCCCTTCAGGTCCTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGCCCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGCTCAGTGTTAGCACTGGAGGAGTCAGCACTCGACACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTTAAGGGTTATAATGGGGAAAAGGAGAAGTTGGGAAGATGCGAACAGTTCTTAATGGAATTGATGAAAGTACCACGGGTGGAATCCAAGCTCAGAGTTTTTTCGTTCAGGATTCAATTCAACTCTCAGGTTTCTGACCTTAGAAATAGCCTGAGTGTTGTGAATTCTGCTTCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAAGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCACGGGACAAGAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTAGATGACCAACTACCGGACGTTTTAGACTTCTCCAAGGATGTTGCTAACCTAGAGCCAGCAGCAAAGATGCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCTATAAACAAAGGATTAGAAAAAGTGGTACAGGAACTATCAACCTCTGAAAATGATGGGCCTATATCAGAAACTTTCTGCAAGAAATTGAAAAAATTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCTCTGGCTTCACTATATTCCAGCGTGGGTAGGAACGTGGATCAATTGATTCTCTATTTTGGTGAAGATCCAGCTCGTTGCCCATTTGAGCAAGTTGTGTCAACTTTGCTCAACTTTACTAGGATGTTCAACAAAGCCCATGAAGAAAACCGCAAGCAGCTAGAGCTTGAAATGAAGAAGACAGCAGAAAGTGAGAAAAAGAAATGTGAATCAGAAAGAATTTTACCTACAGCTATCCGGACTGGCAATGTCAAATAG 3627 0.4411 MLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYRVYMDGIVGQLRENLPDASILIFNFREEDTKSQMANIMSEYDITIMDYPRHYEGVPVLKMELIHHFLRSGESWLSLSQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQRTLDMVYRQAPHELLHLLSPLNPIPSQLRYLLYVSRRNVALDWPPLDRALMLDCIIIRFFPNFEGEGGCHPIFRIYGQDPFSADKNPKMLYSTPKRSKNVRAYKQGECELIKIDINCHIQGDVVIESINLNGNMDREKMMFRVMFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFEKEGLPIEAFAKVQEIFSHVDWMNPKDDAALNVLQQMRASAMNDRLDTVSDQYVENGTLLHEKSPRTPQGNLSEARQGLSSTKRSPDNDKSRKDDKTNKVEGIPQQPNTSNIMYQETARSSERTMESNKCPTGPTNLDIKLQAPHPALSSSVDTAFPPRTPPLRPRSTSAKEVHDSPRQTESPPSYLLPLQSKHQSQDRSSNPTPGTQLSSTVHSKSPEDTISHPSSSAITSPQLSPSLSSKNVNEIPPIRTRLESSPSQPPTPPPPPTPPLKDHRLVRAKPPPPPPPPPKKEVHVKAGPLPSPLSPMNVESQVRGGPSPPPPPLPKEERPVTFNAPPPPPPPCLSGKVAGSTIAPPPPPPPAPPPPLSRASLPSDHINSSLQESAPPPAAPAPPPPPGAPAVPPPPGKGGLKSGSPFPLSLSVSGDGNNVSGPTSSKGRILSRTINSKNNTKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDLSELENLFSAAVPSGPAKKSNVQSSAGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFRIQFNSQVSDLRNSLSVVNSASEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRARDKKMTLMHYLCKVLDDQLPDVLDFSKDVANLEPAAKMQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFCKKLKKFLGSAEADVRSLASLYSSVGRNVDQLILYFGEDPARCPFEQVVSTLLNFTRMFNKAHEENRKQLELEMKKTAESEKKKCESERILPTAIRTGNVK* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0632 1208 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 185 IPR029021 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 849 868 - -
Gso17g0632 1208 Gene3D Formin, FH2 domain 792 1177 IPR042201 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 432 449 - -
Gso17g0632 1208 Gene3D - 194 338 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 408 431 - -
Gso17g0632 1208 SMART PTEN_C2_2 195 334 IPR014020 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 450 484 - -
Gso17g0632 1208 ProSiteProfiles C2 tensin-type domain profile. 197 335 IPR014020 -
Gso17g0632 1208 ProSiteProfiles Formin homology-2 (FH2) domain profile. 794 1192 IPR015425 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 630 644 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 528 606 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 767 799 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 736 761 - -
Gso17g0632 1208 Coils Coil 1167 1187 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 853 867 - -
Gso17g0632 1208 Pfam C2 domain of PTEN tumour-suppressor protein 198 334 IPR014020 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 702 720 - -
Gso17g0632 1208 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 335 IPR035892 -
Gso17g0632 1208 Pfam Formin Homology 2 Domain 798 1166 IPR015425 -
Gso17g0632 1208 PANTHER FORMIN-J 1 1192 - -
Gso17g0632 1208 SUPERFAMILY Formin homology 2 domain (FH2 domain) 807 1183 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 607 622 - -
Gso17g0632 1208 SMART it6_source 794 1208 IPR015425 -
Gso17g0632 1208 Coils Coil 1073 1093 - -
Gso17g0632 1208 Gene3D Protein tyrosine phosphatase superfamily 12 189 IPR029021 -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 665 695 - -
Gso17g0632 1208 MobiDBLite consensus disorder prediction 408 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0632 Gso-Chr17 5850155 5861145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0632 781 1190 Protein tyrosine phosphatase (PTP) family AT5G58160 74.515 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0632 - - gmx:100799319 2254.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0203 5 2137118 2152297 Gso17g0632 17 5850155 5861145 GST