Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0621 ATGTTGCATCCAATTGTCAAGTGGCTGTCATTCACAACATGCATACCCTATTTATTAATCGTTAATTGGAAAAGCCAAAACCCACTACTATACTGCTTTGCATTGCATATCTCTCTCACACTTCTCTCCCATATTCAATTAATCAATATGGCTTCATGTTTTCCAAATGCATCTCCATTTTTGGTCATGCTCGCAATGTGCCTCTTAATTTCCACCTCTGAAGCTGAAAAATATGTGGTTGGAGGCAGTGAAAAATCCTGGAAGTTTCCTCTCTCAAAACCAGATTCACTCAGCCATTGGGCCAACTCTCACCGATTTAAAATCGGCGACACTCTCATATTTAAATACGAAAAGAGAACAGAGTCAGTGCACGAAGTGAATGAGACGGATTATCAAGGGTGCAACACGGTGGGGAAATACCACATTGTGTTCAACGGTGGCAACACCAAGGTGATGCTTACCAAACCTGGATTCAGACACTTCATTAGTGGAAATCAGAGTCATTGCCAGATGGGGTTAAAGCTGGCTGTGCTTGTCATATCGTCGAACAAAACCAAAAAGAATCTTCTTTCCCCATCTCCTTCGCCTTCACCGCCACCATCATCGTTGCTATCACCATCACCTTCGCCACTTCCAAATAATCAAGGTGTTACTAGTAGTTCAGGTGCGGGATTCATCGGGGTTATGATGTGGTTGATGTTATTGCTTTAA 711 0.4248 MLHPIVKWLSFTTCIPYLLIVNWKSQNPLLYCFALHISLTLLSHIQLINMASCFPNASPFLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHEVNETDYQGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVISSNKTKKNLLSPSPSPSPPPSSLLSPSPSPLPNNQGVTSSSGAGFIGVMMWLMLLL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0621 236 Gene3D - 73 182 IPR008972 -
Gso17g0621 236 ProSiteProfiles Phytocyanin domain profile. 76 181 IPR003245 GO:0009055
Gso17g0621 236 SUPERFAMILY Cupredoxins 74 182 IPR008972 -
Gso17g0621 236 CDD Phytocyanin 78 179 - -
Gso17g0621 236 PANTHER BLUE COPPER PROTEIN 62 236 IPR039391 GO:0009055
Gso17g0621 236 Pfam Plastocyanin-like domain 87 172 IPR003245 GO:0009055
Gso17g0621 236 PANTHER EARLY NODULIN-55-2 62 236 - -
Gso17g0621 236 MobiDBLite consensus disorder prediction 192 207 - -
Gso17g0621 236 MobiDBLite consensus disorder prediction 188 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0621 Gso-Chr17 5752764 5754379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0621 57 207 Phytocyanin Superfamily AT4G31840 37.013 1.08e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0621 - - gsj:114392547 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0621 17 5752764 5754379 Gso17g0621 17 5752764 5754379 ECH