Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0613 ATGCAGCAGAGTGATCAAACGGTGTTGAGCTTGAGGCCCGGTGGTGGAAGAGGCAGCAGGCTCCTCGCTCCTCGATTCGACTCCTCCTCTTCGTCCTCTGCTTCCCCTGCTTTTGGCTCCTTTTCCGCTGATCTTCCTCTCCTGCGTCCCCACGCTGGAGCTCCCTCTCCCTTCTCTATCAAAGCTGGAGATGCTCGGTTTGAGGGTCGTGAGCGTGTGCGATACACAAGGGAACAGCTTTTACAGCTTAAAGAGGGTGTTGAGATCCTCGATGATGTTTTAAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAACAACCCCACACAGCAATTTCAAAATCGATATACTGAGCCAGATAATCGTGACTGGCGTGGAAGATCTGGCCAACTTTCTGGTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGGCAATACTAGTAATCGTCAAGACCAACTGAACTCTCAGTTTGCAAGGACACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCGACACTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAACTCTCTCTGACAAGGATCGCGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCGGAGAAATTTGATCTCCTGAAGGGTCAGTTGATCGATTCTGGCATTACATCAGCCGACATATTGAAGGGAGTTATTTCGCTGATATTTGATAAGGCAGTGCTGGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGACGAGCCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAACTGAGACAGATGACTGCCCCTGACCAGGAGATGGAGCGACGGGACAAGGAAAGACTTGTCAAGATTCGAACCCTTGGAAATATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCCGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGACCTCCAGACATCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGCATAAATGATATGTACTTTATCCGGTTGAAAGAATTGAGCACCAATCCCCAACTTGCACCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGATTTGCGTTCTAATAACTGGATTCCAAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATAACCGTGTAGTTTCAGGCGCTCTAGGAAATACCAGTCCAGGAGGATTCCCAATTGCTCGACCTGGTACAGGTGGTTTGATGCCAGGGATGCCAGGGACCAGGAGGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGATGCCTAAGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATGCAAACTGGAGGACATAGCCAGTCTCCCTTTCTTTCCAAGACATCCACTGTTAACTCTAGGTTACTACCTCAAGGTAGTGGTGGTATTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGAGCTGGTGCTCCTTCTGCTGCTCGGCCACCAAACCTTGGTTTTAGTGCTGAACCCACACCTCAAATCCCTTCACCTGTTAAAGCTGTTTCTGCCATACCCGCTGAGAAGCCACAACCTCCAGCTGCAAAATTGAATTTTGATGAACTTCAGCGTAAAACTGTTTCTCTTCTGGAAGAATATTTCAATGTCCGGCTTTTGGACGAGGCATTACAGTGTGTGGAGGAACTAAAAGCTCCAGCTTATTACCCTGAGTTTGTCAAGGAAGCTATTTCCCTTGCTCTAGATAAAAGTCCGCCATGCGCTGAACCTGTTGCCAATCTTTTTGAATATCTGTTCATTAAGAAGATTCTTTCAGCCAGAGACATAGGGACTGGGTGCATGTTATTTGCTTCTCTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGGAAACTAGTTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGACAGAAATCCTTAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTTCTTCTGCGTTGCAGGTAATTACCTCTGCATCTGGGCAAGCTGTGCTGGATGCACAAGCATCTGATATTGAGGCCTGCCAGAGTCTGTTCAACTGA 2370 0.4629 MQQSDQTVLSLRPGGGRGSRLLAPRFDSSSSSSASPAFGSFSADLPLLRPHAGAPSPFSIKAGDARFEGRERVRYTREQLLQLKEGVEILDDVLKIKQDIEAELFGEDQSWARPENNPTQQFQNRYTEPDNRDWRGRSGQLSGNADERSWDNLKENREFGNTSNRQDQLNSQFARTQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPDQEMERRDKERLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDIKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFIRLKELSTNPQLAPRLRFMVRDVLDLRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNNRVVSGALGNTSPGGFPIARPGTGGLMPGMPGTRRMPGMPGIDNDNWEMPKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRLLPQGSGGIISGRSSALVHGAGAPSAARPPNLGFSAEPTPQIPSPVKAVSAIPAEKPQPPAAKLNFDELQRKTVSLLEEYFNVRLLDEALQCVEELKAPAYYPEFVKEAISLALDKSPPCAEPVANLFEYLFIKKILSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVTEILKKVEDDRFQKAIFSSALQVITSASGQAVLDAQASDIEACQSLFN* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0613 789 MobiDBLite consensus disorder prediction 1 40 - -
Gso17g0613 789 SMART if4_15 211 437 IPR003890 GO:0003723|GO:0005515
Gso17g0613 789 Pfam MIF4G domain 211 437 IPR003890 GO:0003723|GO:0005515
Gso17g0613 789 SUPERFAMILY ARM repeat 205 439 IPR016024 -
Gso17g0613 789 MobiDBLite consensus disorder prediction 108 147 - -
Gso17g0613 789 Pfam MA3 domain 625 737 IPR003891 -
Gso17g0613 789 SMART ma3_7 625 737 IPR003891 -
Gso17g0613 789 MobiDBLite consensus disorder prediction 24 39 - -
Gso17g0613 789 Gene3D - 618 784 - -
Gso17g0613 789 SUPERFAMILY ARM repeat 619 774 IPR016024 -
Gso17g0613 789 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 788 IPR045208 GO:0003743
Gso17g0613 789 MobiDBLite consensus disorder prediction 112 127 - -
Gso17g0613 789 ProSiteProfiles MI domain profile. 624 746 IPR003891 -
Gso17g0613 789 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 788 - -
Gso17g0613 789 Gene3D - 203 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0613 Gso-Chr17 5681208 5687548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0613 1 787 Eukaryotic Initiation Factors Gene Family AT5G57870 65.995 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0613 K03260 - gmx:100781275 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0613 17 5681208 5687548 Gso17g0613 17 5681208 5687548 ECH