Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0582 ATGGGTGGTTTAGCTAGCAATCTTCCTCTAATTGTTATGGTGGGTCTGCAAATTCATTATGCAGCACTTGCTATATTCACAAGAGCCGCTTTGTTAGATGGATTGAGTACGACGGTCTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGGCTTTGGCGCCTATGTTTTTCTCTCCTAAGCGGAGACAATCAGTGAAAGATTCTTTGGGATTCAGGAGCTTCTTTTTGATGTTTGTGACCGCTCTTGTTGGAGTCACAGCAAATCAGAATGCATACTTTAAAGGTTTATTTTATGCATCCTCTACTGCAGCTACCGCTATGAGTAATCTGATACCAGCATTAACGTTTGTAATTGCGGCAATTGCGGGATTTGAGAAAGTTGACATAAGCTTAAGAAGCACGGCCAAGATATTAGGGACAGTTTGTTGCGTCGCTGGAGCCTTAACCATGGCTTTGGTCAAAGGACAGAAGCTGTTACACACAGAGTTCCTTCCTTCTATACATCTTACTGGCAGTGAAGGTGACGATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGCAGTGTTTTCTGGTCTTGTTGGATGATCCTGCAGGTACCGATCGCTTCGTGCTGCCCAGACCATTTATCATCAACCTTTTGGATGTGTCTGTTTTCAACAATACAAGCTGCCCTATTTGCCCTTCTTTCAGAGTCGGATCTTCAAGCATGGATTCTACAATCACCTTTACAGATATCATGTTCTTTATATGCAGGAATCGGAATAGCGGTTAGCTTCTTCATTCAATCATGGTGCATCTCAGAAAGAGGTCCCCTGTACTGTGCAATGTTCAACCCTTTGGCAACAGTCATAACTGCTTTGATAAGTGCAACATTCCTACAGGAAGAGGTGTACGTTGGAAGTTTGGTAGGTGCTGTTGGAGTTATTGCTGGTTTATATATTGTGCTTTGGGGTAAAGCCAAAGAGTTTGCTGAGATTAAACCAGAGGCGGCACCACAATCATCAAACTTACAAGATGATCATGATATAAGTAGTAGGATAGATTTGGAACAACCCCTTCTGTCAGAGAAATTGTCCGAACATGTAACAGAAGCAGATAGCAAGGTGTAG 1110 0.4297 MGGLASNLPLIVMVGLQIHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSPKRRQSVKDSLGFRSFFLMFVTALVGVTANQNAYFKGLFYASSTAATAMSNLIPALTFVIAAIAGFEKVDISLRSTAKILGTVCCVAGALTMALVKGQKLLHTEFLPSIHLTGSEGDDWLLGCLLLLASSVFWSCWMILQVPIASCCPDHLSSTFWMCLFSTIQAALFALLSESDLQAWILQSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCAMFNPLATVITALISATFLQEEVYVGSLVGAVGVIAGLYIVLWGKAKEFAEIKPEAAPQSSNLQDDHDISSRIDLEQPLLSEKLSEHVTEADSKV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0582 369 PANTHER WAT1-RELATED PROTEIN 9 345 IPR030184 GO:0016021|GO:0022857
Gso17g0582 369 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020|GO:0016021
Gso17g0582 369 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Gso17g0582 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 320 - -
Gso17g0582 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Gso17g0582 369 PANTHER WAT1-RELATED PROTEIN 9 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0582 Gso-Chr17 5442646 5445150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0582 10 357 Nodulin-like Gene Family AT4G28040 45.714 6.45e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0582 - - gmx:100816384 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0582 17 5442646 5445150 Gso17g0582 17 5442646 5445150 ECH
Gso13g0644 13 20537716 20540180 Gso17g0582 17 5442646 5445150 GST